RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 C17orf112F2Z3M2 114 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 M0QZK8 103 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 NFKBIEO00221 500 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 GGCTO75223 188 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 IDSP22304 550 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SELENOVP59797 346 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ARF3P61204 181 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 FKBP1BP68106 108 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ARF1P84077 181 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 HNRNPA0Q13151 305 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 ARFRP1Q13795 201 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 COTL1Q14019 142 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CHRNA6Q15825 494 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 THOC6Q86W42 341 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 KCNC1P48547 511 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 WNT3AP56704 352 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 RAET1GQ6H3X3 334 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 C5orf46Q6UWT4 87 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 DEFB106AQ8N104 65 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 TEX26Q8N6G2 289 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 KCNC2Q96PR1 638 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ASAH2Q9NR71 780 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CEPT1Q9Y6K0 416 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 PLCH1Q4KWH8 1693 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CKAP5Q14008 2032 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 KRBA1A5PL33 1030 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 NPEPPSL1A6NEC2 478 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 DDOSTP39656 456 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 C1QTNF8P60827 252 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CES3Q6UWW8 571 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 GTF2H5Q6ZYL4 71 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 GABRA5P31644 462 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ZMAT1Q5H9K5 638 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 FAM122BQ7Z309 247 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SERINC5Q86VE9 423 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 UNC13CQ8NB66 2214 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 USP17L7P0C7H9 530 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ARL3P36405 182 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 FCGRTP55899 365 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 PCDH1Q08174 1060 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 NKX1-1Q15270 411 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 ZNF321PQ8N8H1 164 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 TMEM174Q8WUU8 243 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 GLYATL1Q969I3 302 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 L3HYPDHQ96EM0 354 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 RNF170Q96K19 258 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 HSD17B14Q9BPX1 270 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ARHGAP39Q9C0H5 1083 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SLC2A9Q9NRM0 540 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ASB6Q9NWX5 421 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 DKKL1Q9UK85 242 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SCAMP3O14828 347 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 STC1P52823 247 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 RAB3CQ96E17 227 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 WDR55Q9H6Y2 383 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 TMEM185BQ9H7F4 350 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 PTGES2Q9H7Z7 377 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 Q9N2J8 555 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ACP6Q9NPH0 428 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SOHLH2Q9NX45 425 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 C19orf25Q9UFG5 118 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 B4GALT5O43286 388 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CNR1P21554 472 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 BTG1P62324 171 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 TMEM41BQ5BJD5 291 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 LDB1Q86U70 411 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 ADAMTS14Q8WXS8 1223 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 MSI2Q96DH6 328 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 ADAP2Q9NPF8 381 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 TMEM181Q9P2C4 612 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 POLHQ9Y253 713 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ELOA3DA6NLF2 546 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 MMP10P09238 476 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 IRF1P10914 325 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ANXA7P20073 488 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 FGFBP1Q14512 234 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ELOA3BQ3SY89 546 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 UBAP2Q5T6F2 1119 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 ZNF101Q8IZC7 436 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ELOA3Q8NG57 546 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SPTA1P02549 2419 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SLC17A1Q14916 467 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 MANEALQ5VSG8 457 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 KIAA0319Q5VV43 1072 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 SUSD6Q92537 303 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ELF4Q99607 663 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 C1orf123Q9NWV4 160 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 RGPD2P0DJD1 1756 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 ALPPL2P10696 532 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 CHRNB1P11230 501 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 MYLK3Q32MK0 819 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 RNASE10Q5GAN6 216 aaKnown RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 FAM83HQ6ZRV2 1179 aaPredicted RBP7.72□□□□□ -1.17
HTT-201ENST00000355072 FBXO8Q9NRD0 319 aa7.72□□□□□ -1.17
HTT-201ENST00000355072 OR51F1A6NGY5 319 aa7.71□□□□□ -1.17
HTT-201ENST00000355072 CTSEP14091 401 aa7.71□□□□□ -1.17
HTT-201ENST00000355072 PRKCAP17252 672 aa7.71□□□□□ -1.17
HTT-201ENST00000355072 MLLT11Q13015 90 aaPredicted RBP7.71□□□□□ -1.17
HTT-201ENST00000355072 DSC3Q14574 896 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms