RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 AOAHP28039 575 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 UGT2B10P36537 528 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 PREPP48147 710 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 VSX2P58304 361 aaPredicted RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 CRYZQ08257 329 aaKnown RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 NAE1Q13564 534 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 IL18Q14116 193 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 ZSWIM7Q19AV6 140 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 GPR33Q49SQ1 333 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 LCN1P1Q5VSP4 162 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 C1orf53Q5VUE5 145 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 LRFN4Q6PJG9 635 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 TPRG1Q6ZUI0 275 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 Q6ZVL8 140 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 USP45Q70EL2 814 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 GAREM2Q75VX8 874 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 GHDCQ8N2G8 530 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 LRRC17Q8N6Y2 441 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 NELL1Q92832 810 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 RDH12Q96NR8 316 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 MED28Q9H204 178 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 BRD9Q9H8M2 597 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 MRPL17Q9NRX2 175 aaKnown RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 DNAJC11Q9NVH1 559 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 DPP7Q9UHL4 492 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 TMEM5Q9Y2B1 443 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 HSPE1-MOB4S4R3N1 261 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 A0A1B0GVC2 190 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 A6NIN4 97 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 GREM1O60565 184 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 ABLIM3O94929 683 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SLC2A2P11168 524 aaPredicted RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 PRPS2P11908 318 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SNRPD1P62314 119 aaKnown RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 ACSM2AQ08AH3 577 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 TUSC1Q2TAM9 212 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 HKDC1Q2TB90 917 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 RFX4Q33E94 735 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 ACSM2BQ68CK6 577 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 FAM180BQ6P0A1 224 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 ANKRD33Q7Z3H0 272 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 ZNF605Q86T29 641 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 CCDC71Q8IV32 467 aaPredicted RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 C9orf62Q8N4C0 152 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SPPL2AQ8TCT8 520 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SORCS1Q8WY21 1168 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 MRPS31Q92665 395 aaKnown RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 MYDGFQ969H8 173 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 TOX2Q96NM4 488 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 MGLLQ99685 303 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SPOCK3Q9BQ16 436 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SLC29A3Q9BZD2 475 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 CHIAQ9BZP6 476 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 TMEM45AQ9NWC5 275 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 YARS2Q9Y2Z4 477 aaKnown RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 STON1Q9Y6Q2 735 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 TCRBV16S1A1N1A0A5B0 115 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 MAGEB17A8MXT2 336 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 INMT-MINDY4F8WBC2 141 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SAP18O00422 153 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 SLC30A4O14863 429 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 YY2O15391 372 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CXCL10P02778 98 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 URODP06132 367 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ARSBP15848 533 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 AMD1P17707 334 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CD72P21854 359 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 PTPN6P29350 595 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 HLA-FP30511 346 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 GZMMP51124 257 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 RPS7P62081 194 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 LARS2Q15031 903 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 KIAA1614Q5VZ46 1190 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 LUZP2Q86TE4 346 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CALHM3Q86XJ0 350 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ENTHD1Q8IYW4 607 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CHPFQ8IZ52 775 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 BEST4Q8NFU0 473 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 OR52H1Q8NGJ2 320 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SRRQ9GZT4 340 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SLC6A17Q9H1V8 727 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SPNS1Q9H2V7 528 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ZNF768Q9H5H4 540 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 NIPAL2Q9H841 368 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 SIRT5Q9NXA8 310 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 MAFFQ9ULX9 164 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 NDRG2Q9UN36 371 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 SAMD4AQ9UPU9 718 aaKnown RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 CMAHPQ9Y471 501 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 BACE2Q9Y5Z0 518 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ANAPC1Q9H1A4 1944 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 GNG14A0A1W2PPG7 69 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 E7EQ34 232 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 WNT9AO14904 365 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 PCDH17O14917 1159 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 GPX5O75715 221 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 CFDP00746 253 aaPredicted RBP8.93□□□□□ -0.98
SMG6-202ENST00000354901 FABP3P05413 133 aa8.93□□□□□ -0.98
SMG6-202ENST00000354901 ZNF30P17039 623 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms