RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 COPZ1P61923 177 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 NCF4Q15080 339 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 LRRC26Q2I0M4 334 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 TMEM201Q5SNT2 666 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 ZNF544Q6NX49 715 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 OR5AR1Q8NGP9 310 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 GPR151Q8TDV0 419 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 ZNF354BQ96LW1 612 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 F2RL3Q96RI0 385 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 SDHCQ99643 169 aaPredicted RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 AIF1LQ9BQI0 150 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 ZDHHC5Q9C0B5 715 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 ABCG4Q9H172 646 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 TAC3Q9UHF0 121 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 SSR3Q9UNL2 185 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 LSM2Q9Y333 95 aaKnown RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 CKAP5Q14008 2032 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 NUP210Q8TEM1 1887 aaPredicted RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 CAPN5O15484 640 aaPredicted RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 NME6O75414 186 aaPredicted RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 SEMA3DO95025 777 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 FGF19O95750 216 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 PRNPP04156 253 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 C6P13671 934 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 TNNI3P19429 210 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 AZGP1P25311 298 aaKnown RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 METAP1P53582 386 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 MFSD4BQ5TF39 518 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 C12orf73Q69YU5 71 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 PGBD2Q6P3X8 592 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 RBM45Q8IUH3 476 aaKnown RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 ADGRF3Q8IZF5 1079 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 IL17RDQ8NFM7 739 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 OR2L2Q8NH16 312 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 SMPDL3AQ92484 453 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
DDX4-201ENST00000353507 NEK6Q9HC98 313 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 SAGE1Q9NXZ1 904 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 TVP23BQ9NYZ1 205 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 ZNF221Q9UK13 617 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 TRAPPC4Q9Y296 219 aa11.51□□□□□ -0.57
DDX4-201ENST00000353507 C17orf113A0A1B0GUU1 675 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 ACADLP28330 430 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 SF3B4Q15427 424 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX4-201ENST00000353507 FAM129CQ86XR2 697 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 ZNF547Q8IVP9 402 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 DCUN1D3Q8IWE4 304 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 CELF5Q8N6W0 485 aaKnown RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 ZNF513Q8N8E2 541 aaPredicted RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 TM4SF18Q96CE8 201 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 VWCEQ96DN2 955 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 ZBED6CLQ96FA7 236 aaPredicted RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 QRFPRQ96P65 431 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 NDOR1Q9UHB4 597 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 KLHL20Q9Y2M5 609 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 PRKAB1Q9Y478 270 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 SNX11Q9Y5W9 270 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 NUMA1Q14980 2115 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 ZNF670-ZNF695F2Z2N8 137 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 H3BQ06 376 aaPredicted RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 HMGN4O00479 90 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 RHOP08100 348 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 PTPN2P17706 415 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 ENDOUP21128 410 aaKnown RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 CXCR2P25025 360 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 KCNJ5P48544 419 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 WDR5P61964 334 aaKnown RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 LIPKQ5VXJ0 399 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 BCDIN3DQ7Z5W3 292 aaKnown RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 NRARPQ7Z6K4 114 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 NUDT13Q86X67 352 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 IQCF1Q8N6M8 205 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 Q8N9G6 341 aaPredicted RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 LINC00615Q96LM1 132 aaPredicted RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 MS4A8Q9BY19 250 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 BARHL1Q9BZE3 327 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 TPK1Q9H3S4 243 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 NPAP1Q9NZP6 1156 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 P2RX2Q9UBL9 471 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 TBC1D24Q9ULP9 559 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 MYO10Q9HD67 2058 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 HYKKA2RU49 373 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 WWP2O00308 870 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 SPINT1O43278 529 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 SEMA7AO75326 666 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 MOSPD3O75425 235 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 RB1P06400 928 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 GPC1P35052 558 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 RCVRNP35243 200 aa11.5□□□□□ -0.57
DDX4-201ENST00000353507 CCT3P49368 545 aaKnown RBP11.5□□□□□ -0.57
DDX4-201ENST00000353507 MXD1Q05195 221 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms