RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NPAS3Q8IXF0 933 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 FAM181AQ8N9Y4 354 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SMG7Q92540 1137 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 LRR1Q96L50 414 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ACBD6Q9BR61 282 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 THAP7Q9BT49 309 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 LINC00597Q9H2U6 94 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TTYH1Q9H313 450 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 DPAGT1Q9H3H5 408 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SDHAF2Q9NX18 166 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ASIC5Q9NY37 505 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PTGFRNQ9P2B2 879 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PFDN2Q9UHV9 154 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CORO2BQ9UQ03 480 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TRBV4-1A0A0J9YWV2 114 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 GABRR3A8MPY1 467 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 DRD5P21918 477 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 LCN1P31025 176 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 GRK4P32298 578 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 PCGF2P35227 344 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 CRYBA2P53672 197 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 WNT4P56705 351 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 YBEYP58557 167 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ERVK-21P61565 698 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 FABP5Q01469 135 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 BOP1Q14137 746 aaKnown RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 INSL4Q14641 139 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 XKR6Q5GH73 641 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 UNC5DQ6UXZ4 953 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 C17orf107Q6ZR85 190 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 TRILQ7L0X0 811 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 GPR155Q7Z3F1 870 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ADGRG3Q86Y34 549 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 RBFAQ8N0V3 343 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 C1orf52Q8N6N3 182 aaKnown RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 TMEM163Q8TC26 289 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ZC3HAV1LQ96H79 300 aaKnown RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 RTP3Q9BQQ7 232 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 SLC35A5Q9BS91 424 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 PPP1R3EQ9H7J1 279 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ZFP64Q9NPA5 681 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 CTPS2Q9NRF8 586 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 CREBZFQ9NS37 354 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 FNIP2Q9P278 1114 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 LSM2Q9Y333 95 aaKnown RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 PCDHB7Q9Y5E2 793 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 hCG_1807616A0A1W2PRN6 198 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 BNIP3LO60238 219 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ACSL4O60488 711 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 MPC2O95563 127 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 OR56A5P0C7T3 313 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 OSMP13725 252 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 GIFP27352 417 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 BDKRB1P46663 353 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 CLCNKAP51800 687 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 MAZP56270 477 aaKnown RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 KCNC3Q14003 757 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 PLK5Q496M5 336 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 C9orf131Q5VYM1 1079 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 MTFR2Q6P444 385 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 C16orf59Q7L2K0 433 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 WDR53Q7Z5U6 358 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 MON1AQ86VX9 555 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 MEX3DQ86XN8 651 aaKnown RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 SLC30A8Q8IWU4 369 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ADGRF3Q8IZF5 1079 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 SAMD12Q8N8I0 201 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 SLAIN1Q8ND83 568 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 OR52I1Q8NGK6 324 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 OR4C15Q8NGM1 316 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 OR8J1Q8NGP2 316 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 FBXO32Q969P5 355 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 MYEOVQ96EZ4 313 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 HHIPL1Q96JK4 782 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 SORCS2Q96PQ0 1159 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 RBP7Q96R05 134 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ARHGAP39Q9C0H5 1083 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 NT5DC2Q9H857 520 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF304Q9HCX3 659 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 EMC7Q9NPA0 242 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 KLHL1Q9NR64 748 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 SEMA3GQ9NS98 782 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 VPS29Q9UBQ0 182 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 GPR52Q9Y2T5 361 aa7.27□□□□□ -1.25
BRCA1-201ENST00000352993 FNDC1Q4ZHG4 1894 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-201ENST00000352993 RGS11O94810 467 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 C6orf47O95873 294 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 LGI1O95970 557 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 MMP3P08254 477 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF865P0CJ78 1059 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 PIPP12273 146 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-201ENST00000352993 WNT3P56703 355 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 DEFA5Q01523 94 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ARMC12Q5T9G4 340 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 FAM180BQ6P0A1 224 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 GPAT4Q86UL3 456 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 ADGRG2Q8IZP9 1017 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TTLQ8NG68 377 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 MED8Q96G25 268 aa7.26□□□□□ -1.25
BRCA1-201ENST00000352993 TRIB3Q96RU7 358 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms