RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SLC6A15Q9H2J7 730 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 LDAHQ9H6V9 325 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 ACER3Q9NUN7 267 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 KCTD5Q9NXV2 234 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 KCMF1Q9P0J7 381 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 COMMD3Q9UBI1 195 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF222Q9UK12 451 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 ADAM30Q9UKF2 790 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 FZD4Q9ULV1 537 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 GSTK1Q9Y2Q3 226 aa9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 SF3B6Q9Y3B4 125 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-202ENST00000348749 MFSD2BA6NFX1 497 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 IQCF5A8MTL0 148 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 KPNA5O15131 536 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 LRATO95237 230 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC25A14O95258 325 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 C1SP09871 688 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 NUDT7P0C024 238 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 AMD1P17707 334 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ACRV1P26436 265 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 NUP62P37198 522 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 THPOP40225 353 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 XCR1P46094 333 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 BDKRB1P46663 353 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 HNMTP50135 292 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ADAM15Q13444 863 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 GPR176Q14439 515 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 RGNQ15493 299 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SNAPC1Q16533 368 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 OCLNQ16625 522 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF57Q68EA5 555 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 C12orf73Q69YU5 71 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 CFAP77Q6ZQR2 320 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 CFAP52Q8N1V2 620 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 AQP11Q8NBQ7 271 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 CEP76Q8TAP6 659 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SELENOMQ8WWX9 145 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 TM9SF4Q92544 642 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC9A6Q92581 669 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 RIT1Q92963 219 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 GTPBP3Q969Y2 492 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 DACT3Q96B18 629 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 MTFMTQ96DP5 389 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 LINC00052Q96N35 136 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 OR2M2Q96R28 347 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 PIP5K1AQ99755 562 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ATF6BQ99941 703 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ELOVL6Q9H5J4 265 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 BPIFA1Q9NP55 256 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 RNF181Q9P0P0 153 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SESN1Q9Y6P5 492 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 PLXNA4Q9HCM2 1894 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 KCNE1BA0A087WTH5 132 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 C1orf226A1L170 272 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 PRAMEF25A6NGN4 478 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 KRBOX1C9JBD0 128 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 GTPBP1O00178 669 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SMAD6O43541 496 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SLC19A2O60779 497 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 POU2F1P14859 743 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 BPIP17213 487 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 RAB3AP20336 220 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 MAPK8P45983 427 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ZNF81P51508 661 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 EPHA4P54764 986 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 NFATC2Q13469 925 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 MADCAM1Q13477 382 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 TPBGQ13641 420 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ZMYND11Q15326 602 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ARHGAP15Q53QZ3 475 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 SPIN4Q56A73 249 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ARMC12Q5T9G4 340 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 MZT2AQ6P582 158 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 CD200R1LQ6Q8B3 271 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 USP30Q70CQ3 517 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ASPGQ86U10 573 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 LAPTM4BQ86VI4 370 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 MS4A15Q8N5U1 240 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ATAD1Q8NBU5 361 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 OR6M1Q8NGM8 313 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 B3GALT6Q96L58 329 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 IL4I1Q96RQ9 567 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 PELOQ9BRX2 385 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 WACQ9BTA9 647 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 APOL5Q9BWW9 433 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 TSSK6Q9BXA6 273 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 CCSER2Q9H7U1 834 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 DNAJC27Q9NZQ0 273 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 LHX3Q9UBR4 397 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 MALT1Q9UDY8 824 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 GMEB2Q9UKD1 530 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 PRELID3BQ9Y3B1 194 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 HRH3Q9Y5N1 445 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 ACTL7AQ9Y615 435 aa9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 DNMT3AQ9Y6K1 912 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-202ENST00000348749 GLYATL1P3A0A0U1RQE8 302 aa9.82□□□□□ -0.84
CHRNA1-202ENST00000348749 MTMR11A4FU01 709 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms