RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 NUDT7P0C024 238 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 C8orf89P0DMQ9 161 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 RAP2AP10114 183 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 BMP2P12643 396 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 MAGEA8P43361 318 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 SEPHS1P49903 392 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 DSTNP60981 165 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 SHC2P98077 582 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 SQSTM1Q13501 440 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 LPAL2Q16609 132 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 ZNF630Q2M218 657 aaPredicted RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 INAVAQ3KP66 663 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 LRRC23Q53EV4 343 aaPredicted RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 SNAP47Q5SQN1 464 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 INTS11Q5TA45 600 aaKnown RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 LPCAT4Q643R3 524 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 C6orf120Q7Z4R8 191 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 LRRC25Q8N386 305 aaPredicted RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 OR9A4Q8NGU2 314 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 ADAMTS18Q8TE60 1221 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 RNF145Q96MT1 663 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 GTPBP2Q9BX10 602 aaKnown RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 MAGIXQ9H6Y5 334 aa17.6■□□□□ 0.41
PTN-201ENST00000348225 CLK4Q9HAZ1 481 aaKnown RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 ZCCHC3Q9NUD5 404 aaKnown RBP17.6■□□□□ 0.41
PTN-201ENST00000348225 LY6G6EA0A0G2JKS1 128 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 NSA2O95478 260 aaKnown RBP17.59■□□□□ 0.41
PTN-201ENST00000348225 KDELR2P33947 212 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 AVPR1BP47901 424 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 ANXA11P50995 505 aaKnown RBP17.59■□□□□ 0.41
PTN-201ENST00000348225 SIM1P81133 766 aaPredicted RBP17.59■□□□□ 0.41
PTN-201ENST00000348225 TP53BP2Q13625 1128 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 GRAMD1BQ3KR37 738 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 TMEM71Q6P5X7 295 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 SZRD1Q7Z422 152 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 D2HGDHQ8N465 521 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 ADCY4Q8NFM4 1077 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 OR5T3Q8NGG3 340 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 OR56A1Q8NGH5 318 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 DNAJC9Q8WXX5 260 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 TANKQ92844 425 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 SLC47A1Q96FL8 570 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 SLC41A2Q96JW4 573 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 SLC35G5Q96KT7 338 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 TMEM121BQ9BXQ6 578 aaPredicted RBP17.59■□□□□ 0.41
PTN-201ENST00000348225 C3orf14Q9HBI5 128 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 ENAMQ9NRM1 1142 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 THUMPD1Q9NXG2 353 aaKnown RBP17.59■□□□□ 0.41
PTN-201ENST00000348225 TMEM9Q9P0T7 183 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 PCDHGA5Q9Y5G8 931 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 U3KQA8 63 aa17.59■□□□□ 0.41
PTN-201ENST00000348225 A0A0A6YYC8 382 aaPredicted RBP17.58■□□□□ 0.41
PTN-201ENST00000348225 BLACEA4D250 179 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 I3L1I5 382 aaPredicted RBP17.58■□□□□ 0.41
PTN-201ENST00000348225 CYR61O00622 381 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 TPST1O60507 370 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 DNAJB6O75190 326 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 MPLP40238 635 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 XKP51811 444 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 CASP9P55211 416 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 PRR5P85299 388 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 SCARB2Q14108 478 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 LRRC36Q1X8D7 754 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 ZNF750Q32MQ0 723 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 CEACAM20Q6UY09 585 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 OR2I1PQ8NGU4 316 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 ZNF184Q99676 751 aaPredicted RBP17.58■□□□□ 0.41
PTN-201ENST00000348225 DPYSL5Q9BPU6 564 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 CHID1Q9BWS9 393 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 ZNF768Q9H5H4 540 aaKnown RBP17.58■□□□□ 0.41
PTN-201ENST00000348225 AGPAT4Q9NRZ5 378 aa17.58■□□□□ 0.41
PTN-201ENST00000348225 OR2B3O76000 313 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 PRKD3O94806 890 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 FHP07954 510 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 MSL3P1P0C860 447 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 ARAFP10398 606 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 RNH1P13489 461 aaKnown RBP17.58■□□□□ 0.4
PTN-201ENST00000348225 PPP2R1BP30154 601 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 DUSP3P51452 185 aaPredicted RBP17.58■□□□□ 0.4
PTN-201ENST00000348225 CDK6Q00534 326 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 DUSP2Q05923 314 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 KCNAB1Q14722 419 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 C16orf72Q14CZ0 275 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 FAM214AQ32MH5 1076 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 PERM1Q5SV97 790 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 ENPP6Q6UWR7 440 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 TMEM107Q6UX40 140 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 OR9A2Q8NGT5 310 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 FAM110BQ8TC76 370 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 MAL2Q969L2 176 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 PYURFQ96I23 114 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 SEMA6AQ9H2E6 1030 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 VCXQ9H320 206 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 FANCEQ9HB96 536 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 RAB23Q9ULC3 237 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 ANGPT4Q9Y264 503 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 MRPS33Q9Y291 106 aaKnown RBP17.58■□□□□ 0.4
PTN-201ENST00000348225 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.4
PTN-201ENST00000348225 LRRC42Q9Y546 428 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms