RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 TMEM44Q2T9K0 475 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CYP27C1Q4G0S4 372 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ZNF628Q5EBL2 1059 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ZNF730Q6ZMV8 503 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CREB3L2Q70SY1 520 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 HTR3DQ70Z44 454 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 IFNL1Q8IU54 200 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 OR5AK3PQ8NH89 298 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TMEM163Q8TC26 289 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 OR5P2Q8WZ92 322 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 NEIL2Q969S2 332 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SEMA3GQ9NS98 782 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 MRPS18AQ9NVS2 196 aaKnown RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 RHCGQ9UBD6 479 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SPIN1Q9Y657 262 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SLC5A10A0PJK1 596 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PIPSLA2A3N6 862 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PRR23AA6NEV1 266 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 GRM6O15303 877 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SELPP16109 830 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PKLRP30613 574 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 FGF9P31371 208 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 GABRA5P31644 462 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 GPC1P35052 558 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PRLHRP49683 370 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 STK19P49842 368 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 LIM2P55344 173 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 FOXD4Q12950 439 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 MRPL28Q13084 256 aaKnown RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CCDC58Q4VC31 144 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ZNF648Q5T619 568 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 C22orf42Q6IC83 251 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PGBD2Q6P3X8 592 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 OR52I1Q8NGK6 324 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 FYTTD1Q96QD9 318 aaKnown RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TRIM39Q9HCM9 518 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 FGF20Q9NP95 211 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 MRPL39Q9NYK5 338 aaKnown RBP9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ACAD8Q9UKU7 415 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PCM1Q15154 2024 aa9.62□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PRRG1O14668 218 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 FFAR1O14842 300 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 MMP20O60882 483 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ZNF780AO75290 641 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SLC43A1O75387 559 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 NME6O75414 186 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 NUDT1P36639 197 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 KIR2DL3P43628 341 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 RECQLP46063 649 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 BDKRB1P46663 353 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 GATMP50440 423 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SMSP52788 366 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TARDBPQ13148 414 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 RIN1Q13671 783 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PUM1Q14671 1186 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 BICRALQ6AI39 1079 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 GDPD4Q6W3E5 623 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 QSOX2Q6ZRP7 698 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 OTOP2Q7RTS6 562 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CHFRQ96EP1 664 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TRMT61AQ96FX7 289 aaKnown RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PLSCR3Q9NRY6 295 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TAS2R7Q9NYW3 318 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TVP23BQ9NYZ1 205 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CD84Q9UIB8 345 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 MBD1Q9UIS9 605 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 FAM240BA0A1B0GVZ2 78 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 OR2AG2A6NM03 316 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 BNIP3LO60238 219 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SOX14O95416 240 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ACP2P11117 423 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ALAS2P22557 587 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CD70P32970 193 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TBPL1P62380 186 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 MAB21L1Q13394 359 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SF3A2Q15428 464 aaKnown RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SEC23BQ15437 767 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TATDN3Q17R31 274 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ATAT1Q5SQI0 421 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 Q8N402 240 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 YIPF7Q8N8F6 280 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ZNF557Q8N988 423 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SUN5Q8TC36 379 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 NR4A3Q92570 626 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 C1GALT1C1Q96EU7 318 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 ZIC5Q96T25 663 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 SPATA5L1Q9BVQ7 753 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TRIM45Q9H8W5 580 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TESQ9UGI8 421 aaKnown RBP9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PLXNA2O75051 1894 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 A0A1W2PRQ8 180 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 HEPACAM2A8MVW5 462 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 PLD2O14939 933 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 CHST10O43529 356 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TSPAN6O43657 245 aa9.61□□□□□ -0.87
TRAPPC6B-202ENST00000347691 TLX2O43763 284 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms