RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CLDN16Q9Y5I7 305 aa14.68□□□□□ -0.06
TSPAN4-201ENST00000346501 GNG14A0A1W2PPG7 69 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 G3V2L1 256 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 CHEK2O96017 543 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SLC35E2P0CK97 266 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 GALNSP34059 522 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 GPR143P51810 404 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 PER3P56645 1201 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 RNF4P78317 190 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 ALDH6A1Q02252 535 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SRSF11Q05519 484 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SLC18A2Q05940 514 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 ZNF267Q14586 743 aaPredicted RBP14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SPDYAQ5MJ70 313 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 OPN5Q6U736 354 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 GFRALQ6UXV0 394 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SH2D5Q6ZV89 423 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 GALNTL5Q7Z4T8 443 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 CROCCP2Q86T23 111 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 C1orf52Q8N6N3 182 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 AMER2Q8N7J2 671 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SLC22A8Q8TCC7 542 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SENP5Q96HI0 755 aaPredicted RBP14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 TRMOQ9BU70 441 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 GSTO2Q9H4Y5 243 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 RRAGDQ9NQL2 400 aaPredicted RBP14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 OXSMQ9NWU1 459 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 MKS1Q9NXB0 559 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SENP1Q9P0U3 644 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 MYOTQ9UBF9 498 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 LGALS13Q9UHV8 139 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 EMCNQ9ULC0 261 aa14.67□□□□□ -0.06
TSPAN4-201ENST00000346501 SHANK1Q9Y566 2161 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 A0A1B0GTL3 188 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 FOXO6A8MYZ6 492 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 MAN1A2O60476 641 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 TRIM13O60858 407 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 PRKRAO75569 313 aaKnown RBP14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 OR2J2O76002 312 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 NEURL1O76050 574 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 GSTM5P46439 218 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 ALDH9A1P49189 494 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 CASP6P55212 293 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 KRT71Q3SY84 523 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 HLA-DQA1Q5Y7H0 255 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 RNF111Q6ZNA4 994 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 FRMD7Q6ZUT3 714 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 TRABD2AQ86V40 505 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 SAMD14Q8IZD0 417 aaPredicted RBP14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 MREGQ8N565 214 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 POGLUT1Q8NBL1 392 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 AGAP11Q8TF27 550 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 PPWD1Q96BP3 646 aaKnown RBP14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 SCMH1Q96GD3 660 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 FBXL20Q96IG2 436 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 HBEGFQ99075 208 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 SLX1AQ9BQ83 275 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 TRIM45Q9H8W5 580 aaPredicted RBP14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 PFDN4Q9NQP4 134 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 GIMAP4Q9NUV9 329 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 TEX10Q9NXF1 929 aaPredicted RBP14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 SEC14L3Q9UDX4 400 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 MCM8Q9UJA3 840 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 ZNF225Q9UK10 706 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 PLLPQ9Y342 182 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 TIMM22Q9Y584 194 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 ZNF780BQ9Y6R6 833 aa14.66□□□□□ -0.06
TSPAN4-201ENST00000346501 OR6C76A6NM76 312 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 WWP2O00308 870 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 PCDH7O60245 1069 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 NME2P1O60361 137 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ERAL1O75616 437 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 DDAH2O95865 285 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 MYZAPP0CAP1 466 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 PORP16435 677 aaPredicted RBP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 NME2P22392 152 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ST13P50502 369 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 XKP51811 444 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 HK2P52789 917 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ERVK-8P63133 956 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 HEPACAMQ14CZ8 416 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 KRTCAP3Q53RY4 240 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 GALNT12Q8IXK2 581 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 BANPQ8N9N5 519 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 NUBPLQ8TB37 319 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ZNF721Q8TF20 911 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 SSC4DQ8WTU2 575 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 CHTF18Q8WVB6 975 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 TAAR6Q96RI8 345 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 EML4Q9HC35 981 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ZNF223Q9UK11 482 aaPredicted RBP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 ERVK-19Q9WJR5 959 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 SLC5A6Q9Y289 635 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 PCDHA9Q9Y5H5 950 aa14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 FLNBO75369 2602 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-201ENST00000346501 PGRMC2O15173 223 aa14.64□□□□□ -0.07
TSPAN4-201ENST00000346501 RGS16O15492 202 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-201ENST00000346501 ERLIN1O75477 346 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms