RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 MTERF1Q99551 399 aaKnown RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 MID1IP1Q9NPA3 183 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 SLAMF7Q9NQ25 335 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 DMRT3Q9NQL9 472 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 STK38LQ9Y2H1 464 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 LRRK2Q5S007 2527 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 ANKDD1BA6NHY2 528 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 PLPP1O14494 284 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 AZIN1O14977 448 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 PRKNO60260 465 aaPredicted RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 SKAP2O75563 359 aaPredicted RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 MLYCDO95822 493 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 CYC1P08574 325 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 EPB42P16452 691 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 RAB38P57729 211 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 OR4D2P58180 307 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 DDX39BQ13838 428 aaKnown RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 NXNQ6DKJ4 435 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 MED27Q6P2C8 311 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 CHSY3Q70JA7 882 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 HPS6Q86YV9 775 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 BEST3Q8N1M1 668 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 ZNF321PQ8N8H1 164 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 TTLQ8NG68 377 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 TRPC4APQ8TEL6 797 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 SIGLEC12Q96PQ1 595 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 MYCBPQ99417 103 aaPredicted RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 PITHD1Q9GZP4 211 aaPredicted RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 NOL11Q9H8H0 719 aaKnown RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 IPPKQ9H8X2 491 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 MRGBPQ9NV56 204 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 ANKRD10Q9NXR5 420 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 DAPP1Q9UN19 280 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 FIS1Q9Y3D6 152 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 TNPO3Q9Y5L0 923 aaKnown RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 A0A1W2PS29 197 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 PRMT3O60678 531 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 EEDO75530 441 aaKnown RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 ATP5A1P25705 553 aaKnown RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 CPA2P48052 419 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 TNFSF10P50591 281 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 RPS13P62277 151 aaKnown RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 ID2Q02363 134 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF169Q14929 603 aaPredicted RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 KANK2Q63ZY3 851 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 DGAT2L6Q6ZPD8 337 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 RIPOR1Q6ZS17 1223 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF227Q86WZ6 799 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 L3MBTL4Q8NA19 623 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 APCDD1LQ8NCL9 501 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 RBM15BQ8NDT2 890 aaKnown RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 ELP5Q8TE02 316 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 MMP25Q9NPA2 562 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 PRDM9Q9NQV7 894 aa15.02□□□□□ -0.01
RAB5C-201ENST00000346213 FARSBQ9NSD9 589 aaKnown RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 G3BP2Q9UN86 482 aaKnown RBP15.02□□□□□ -0.01
RAB5C-201ENST00000346213 A8MUI8 341 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 TMPRSS11DO60235 418 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 SEMA7AO75326 666 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 SCELO95171 688 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 IL10P22301 178 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 GPR143P51810 404 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 PMP22Q01453 160 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 NR6A1Q15406 480 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 CPSF6Q16630 551 aaKnown RBP eCLIP15.01□□□□□ -0.013e-7■□□□□ 11.2
RAB5C-201ENST00000346213 DNAL1Q4LDG9 190 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 TCHHL1Q5QJ38 904 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-201ENST00000346213 KHDRBS2Q5VWX1 349 aaKnown RBP15.01□□□□□ -0.01
RAB5C-201ENST00000346213 CLEC6AQ6EIG7 209 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 LETMD1Q6P1Q0 360 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 C16orf47Q6ZP98 133 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-201ENST00000346213 ARHGAP24Q8N264 748 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 ACOT4Q8N9L9 421 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 LMF1Q96S06 567 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 SERINC2Q96SA4 455 aa15.01□□□□□ -0.01
RAB5C-201ENST00000346213 MMADHCQ9H3L0 296 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-201ENST00000346213 SEMA4BQ9NPR2 832 aaPredicted RBP15.01□□□□□ -0.01
RAB5C-201ENST00000346213 SAGE2PA6NJ88 616 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 TMEM200CA6NKL6 621 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 PCDH17O14917 1159 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ESRRBO95718 433 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 COX4I1P13073 169 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 PIK3R1P27986 724 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 GSTM2P28161 218 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 MTTPP55157 894 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 PKNOX1P55347 436 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF33BQ06732 778 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ZRSR2Q15696 482 aaKnown RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 ACER2Q5QJU3 275 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 DEPDC1Q5TB30 811 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 METTL2BQ6P1Q9 378 aaKnown RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 TRIM40Q6P9F5 258 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 PACS2Q86VP3 889 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 MYLK4Q86YV6 388 aaPredicted RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 FAM13CQ8NE31 585 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 M1APQ8TC57 530 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 GRHL3Q8TE85 626 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 DOK4Q8TEW6 326 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ANKRD9Q96BM1 317 aaPredicted RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 MTFMTQ96DP5 389 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms