RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 C20orf202A1L168 122 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 TFPTP0C1Z6 253 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 BMP2P12643 396 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 ARL2P36404 184 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 FAM83HQ6ZRV2 1179 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 ANKRD60Q9BZ19 345 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.61■□□□□ 0.571e-6■■■■□ 20.1
HDAC4-201ENST00000345617 DPEP2Q9H4A9 486 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 RNF215Q9Y6U7 377 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 COL5A2P05997 1499 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 F5H5P2 479 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 SAP18O00422 153 aaKnown RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 ASF1BQ9NVP2 202 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 LUZP4Q9P127 313 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 GSTM4Q03013 218 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 OR2T35Q8NGX2 323 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 LPPQ93052 612 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 MKRN2Q9H000 416 aaKnown RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 SOX14O95416 240 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 AK1P00568 194 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 NIPAL3Q6P499 406 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 CREB3L2Q70SY1 520 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 TMPRSS12Q86WS5 348 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 C3orf58Q8NDZ4 430 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 PRODH2Q9UF12 536 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 FOXO6A8MYZ6 492 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 ITGB5P18084 799 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 SLC2A7Q6PXP3 512 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 THOC6Q86W42 341 aaKnown RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 UQCC2Q9BRT2 126 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 D6RAR5 112 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 HOXA9P31269 272 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 SF3A2Q15428 464 aaKnown RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 SIRPB2Q5JXA9 342 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 C1orf52Q8N6N3 182 aaKnown RBP18.61■□□□□ 0.57
HDAC4-201ENST00000345617 SDHAF2Q9NX18 166 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 KCNAB2Q13303 367 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 ITPRIPL2Q3MIP1 535 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 C1orf127Q8N9H9 656 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 PLIN4Q96Q06 1357 aa18.61■□□□□ 0.57
HDAC4-201ENST00000345617 CHD5Q8TDI0 1954 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 SOCS5O75159 536 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF808Q8N4W9 903 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 OR5H2Q8NGV7 314 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 OR5AK3PQ8NH89 298 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 KCNJ9Q92806 393 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 TRMT61BQ9BVS5 477 aaKnown RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 DDX60Q8IY21 1712 aaKnown RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 RALGAPA1Q6GYQ0 2036 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 KCNC1P48547 511 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 RAB4BP61018 213 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 BEX3Q00994 111 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 TMEM236Q5W0B7 351 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 TMIGD1Q6UXZ0 262 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 ACBD7Q8N6N7 88 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 ACOT7O00154 380 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 TMEM63AO94886 807 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 UGCGQ16739 394 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 CLVS2Q5SYC1 327 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 TUBG2Q9NRH3 451 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 HAS3O00219 553 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 JUNP05412 331 aaKnown RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 FHP07954 510 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 BDKRB2P30411 391 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 PSRC1Q6PGN9 363 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 OR2AP1Q8NGE2 309 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 RPS10P5Q9NQ39 176 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 UNC13CQ8NB66 2214 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 BOLA2-SMG1P6H3BVE0 249 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 EMC10Q5UCC4 262 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 OR51G2Q8NGK0 314 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 SETD7Q8WTS6 366 aaKnown RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 ERVK13-1Q9NX77 482 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 COQ4Q9Y3A0 265 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 GRXCR2A6NFK2 248 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 GOSR2O14653 212 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 SPATA31D3P0C874 917 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF84P51523 738 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 FGFBP1Q14512 234 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 SPATA31D4Q6ZUB0 917 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 CEP68Q76N32 757 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 OR8K3Q8NH51 312 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 ZNF419Q96HQ0 510 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 CDK15Q96Q40 435 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 DNAJC5Q9H3Z4 198 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 PNO1Q9NRX1 252 aaKnown RBP18.6■□□□□ 0.57
HDAC4-201ENST00000345617 DOCK9Q9BZ29 2069 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 RSC1A1Q92681 617 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 IL36AQ9UHA7 158 aa18.6■□□□□ 0.57
HDAC4-201ENST00000345617 EOMESO95936 686 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 PLEKHS1Q5SXH7 462 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 CNIH3Q8TBE1 160 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 LRRC46Q96FV0 321 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 LYRM1O43325 122 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 JRKO75564 520 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 ELP2Q6IA86 826 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 SLC39A4Q6P5W5 647 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms