RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 DGAT2Q96PD7 388 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 ERVK-6Q9BXR3 956 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 ANKZF1Q9H8Y5 726 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 TEX10Q9NXF1 929 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-202ENST00000344726 MYOTQ9UBF9 498 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 EMCNQ9ULC0 261 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 NPIPA1Q9UND3 350 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 YARS2Q9Y2Z4 477 aaKnown RBP13.39□□□□□ -0.27
HMGN3-202ENST00000344726 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 ARHGAP10A1A4S6 786 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 PGRMC2O15173 223 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 SLC19A2O60779 497 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 SUPT7LO94864 414 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 OR6B1O95007 311 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 IGKV3-11P04433 115 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 NR2F6P10588 404 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 TAC1P20366 129 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 TLX1P31314 330 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 BUD31P41223 144 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 SLCO1A2P46721 670 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 PER3P56645 1201 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 RNF4P78317 190 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 ALDH6A1Q02252 535 aaKnown RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 IFT88Q13099 833 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 C3AR1Q16581 482 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 NCCRP1Q6ZVX7 275 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 FGD2Q7Z6J4 655 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 MYRIPQ8NFW9 859 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 UBLCP1Q8WVY7 318 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-202ENST00000344726 RASL10BQ96S79 203 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 HBEGFQ99075 208 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 ELOVL6Q9H5J4 265 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 TRPS1Q9UHF7 1281 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 TINAGQ9UJW2 476 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 ZNF835Q9Y2P0 537 aa13.38□□□□□ -0.27
HMGN3-202ENST00000344726 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 GPR75O95800 540 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 KLK1P06870 262 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 GSTA1P08263 222 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 ALOX15P16050 662 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 IMPDH1P20839 514 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 ATP5F1P24539 256 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 RFC3P40938 356 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 SOX3P41225 446 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 MEOX1P50221 254 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 PRKAA2P54646 552 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 PLIN5Q00G26 463 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 IL20RBQ6UXL0 311 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 COMMD6Q7Z4G1 85 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 ST13P4Q8IZP2 240 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 CDYL2Q8N8U2 506 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 FAM98AQ8NCA5 519 aaKnown RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 OR8K3Q8NH51 312 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 EPS8L3Q8TE67 593 aaKnown RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 TMEM125Q96AQ2 219 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 L3HYPDHQ96EM0 354 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 RBM18Q96H35 190 aaKnown RBP13.37□□□□□ -0.27
HMGN3-202ENST00000344726 ZNF382Q96SR6 550 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 DEPPQ9NTK1 212 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
HMGN3-202ENST00000344726 A0A0G2JMM0 328 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 A0A1W2PPB8 328 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 A0A1W2PRS3 328 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 PINLYPA6NC86 204 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 SMIM23A6NLE4 172 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 A8MVJ9 347 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 KIR3DP1A8MWS1 328 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 G3V2L1 256 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 MANBAO00462 879 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 CCL21O00585 134 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 PEX1O43933 1283 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 CLPSP04118 112 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 COX7A2P14406 83 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 CHN1P15882 459 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 HTR6P50406 440 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 GPR85P60893 370 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 BIKQ13323 160 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 CDSNQ15517 529 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 C10orf62Q5T681 223 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-202ENST00000344726 Q6ZPB1 254 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-202ENST00000344726 TDRPQ86YL5 185 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 MMP21Q8N119 569 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 PSD4Q8NDX1 1056 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 ASB15Q8WXK1 588 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 FBXL20Q96IG2 436 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 C12orf65Q9H3J6 166 aaKnown RBP13.36□□□□□ -0.27
HMGN3-202ENST00000344726 GSTO2Q9H4Y5 243 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms