RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TMEM107Q6UX40 140 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 GATAD2AQ86YP4 633 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 ZDHHC21Q8IVQ6 265 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SLC35F3Q8IY50 421 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SLC38A5Q8WUX1 472 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 C16orf58Q96GQ5 468 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SERINC2Q96SA4 455 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 BDH2Q9BUT1 245 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 TMEM38AQ9H6F2 299 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SMURF2Q9HAU4 748 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 NEUROD4Q9HD90 331 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 TMEM9Q9P0T7 183 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 LRIT1Q9P2V4 623 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
CDC42-202ENST00000344548 SAMD4AQ9UPU9 718 aaKnown RBP12.8□□□□□ -0.36
CDC42-202ENST00000344548 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 LILRA5A6NI73 299 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 HRO43593 1189 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 FKBP9O95302 570 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 KRT75O95678 551 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 LYNP07948 512 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 ARAFP10398 606 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 NR2F6P10588 404 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 CPN2P22792 545 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 GPC1P35052 558 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 OR1E2P47887 323 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 DSTNP60981 165 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 TNFRSF17Q02223 184 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 FKBP9P1Q75LS8 142 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 WDR53Q7Z5U6 358 aaPredicted RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 EID3Q8N140 333 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 DNAJC22Q8N4W6 341 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 SMYD1Q8NB12 490 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 NCSTNQ92542 709 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 KAT2AQ92830 837 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 THAP11Q96EK4 314 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 MAGIXQ9H6Y5 334 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 IL1RAPQ9NPH3 570 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 ZCCHC3Q9NUD5 404 aaKnown RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 DNAJB9Q9UBS3 223 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 KCNE3Q9Y6H6 103 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 LDB3O75112 727 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 RECKO95980 971 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 BCHEP06276 602 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 TFPTP0C1Z6 253 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 OR12D1P0DN82 309 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 MC3RP41968 323 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 GABRA4P48169 554 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 BIRC2Q13490 618 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 CEBPEQ15744 281 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDC42-202ENST00000344548 LYSMD4Q5XG99 296 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 CEP68Q76N32 757 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 STK32CQ86UX6 486 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 CHERPQ8IWX8 916 aaKnown RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 MARVELD2Q8N4S9 558 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 OR9A4Q8NGU2 314 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 SPATA9Q9BWV2 254 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 PRMT8Q9NR22 394 aaPredicted RBP12.79□□□□□ -0.36
CDC42-202ENST00000344548 SLC22A7Q9Y694 548 aa12.79□□□□□ -0.36
CDC42-202ENST00000344548 B4GAT1O43505 415 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 B3GALT2O43825 422 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 GALR3O60755 368 aaPredicted RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 SNAP29O95721 258 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 HOXA6P31267 233 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 DCTP40126 519 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 SHC2P98077 582 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 TGM3Q08188 693 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 SIGLEC14Q08ET2 396 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 BLMHQ13867 455 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 KCNAB1Q14722 419 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 MYBPC3Q14896 1274 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 SYPL1Q16563 259 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 DUSP7Q16829 419 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 PMS2CLQ68D20 193 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 NATD1Q8N6N6 113 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 COL26A1Q96A83 441 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 TBC1D20Q96BZ9 403 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 TMEM19Q96HH6 336 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 OR51I1Q9H343 314 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 LYARQ9NX58 379 aaKnown RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 OR2W5A6NFC9 320 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 H0YJX3 145 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 CYR61O00622 381 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 RDH16O75452 317 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 HMGN2P05204 90 aaKnown RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 NTSP30990 170 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms