RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 NDUFAF7Q7L592 441 aa7.46□□□□□ -1.21
KPNA1-201ENST00000344337 RBM45Q8IUH3 476 aaKnown RBP7.46□□□□□ -1.21
KPNA1-201ENST00000344337 PACRGLQ8N7B6 248 aa7.46□□□□□ -1.21
KPNA1-201ENST00000344337 FAM46DQ8NEK8 389 aa7.46□□□□□ -1.21
KPNA1-201ENST00000344337 CD99L2Q8TCZ2 262 aa7.46□□□□□ -1.21
KPNA1-201ENST00000344337 KXD1Q9BQD3 176 aa7.46□□□□□ -1.21
KPNA1-201ENST00000344337 SPACA6W5XKT8 324 aa7.46□□□□□ -1.21
KPNA1-201ENST00000344337 FAM86C2PA6NEL3 165 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ZNF195O14628 629 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ADAM12O43184 909 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PGAM2P15259 253 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 HOXB8P17481 243 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CD72P21854 359 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 AHRP35869 848 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 AIF1P55008 147 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 GRM2Q14416 872 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CCNJQ5T5M9 372 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 KANK2Q63ZY3 851 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CFAP77Q6ZQR2 320 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 MMP27Q9H306 513 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CHMP1AQ9HD42 196 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ARPC5O15511 151 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PRAMEF11O60813 436 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CBR1P16152 277 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PSMB5P28074 263 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 SLC11A1P49279 550 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 NTHL1P78549 312 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CCSMST1Q4G0I0 132 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 Q6ZSR9 355 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 FAM220AQ7Z4H9 259 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 SYT14Q8NB59 555 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PIGXQ8TBF5 258 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 MOV10Q9HCE1 1003 aaKnown RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 GALNT9Q9HCQ5 603 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 NLE1Q9NVX2 485 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 MGAT4CQ9UBM8 478 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TJP1Q07157 1748 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 GFRA2O00451 464 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ALDOBP05062 364 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 DNASE1P24855 282 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 STOMP27105 288 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CASP3P42574 277 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 GMFBP60983 142 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 AQP6Q13520 282 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 RCAN2Q14206 197 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PUM1Q14671 1186 aaKnown RBP eCLIP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 RPTNQ6XPR3 784 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CERS6Q6ZMG9 384 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 VASH1Q7L8A9 365 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 C12orf76Q8N812 135 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 C1QTNF1Q9BXJ1 281 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 MAF1Q9H063 256 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ARL6Q9H0F7 186 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 NMNAT1Q9HAN9 279 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 HMX1Q9NP08 348 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 INIPQ9NRY2 104 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 STARD5Q9NSY2 213 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CUEDC1Q9NWM3 386 aaPredicted RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ANXA2P2A6NMY6 339 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TTC34A8MYJ7 566 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PAHP00439 452 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ANXA2P07355 339 aaKnown RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ANXA8P13928 327 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ASMTP46597 345 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ADAM15Q13444 863 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TATDN3Q17R31 274 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TMEM31Q5JXX7 168 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 RTP2Q5QGT7 225 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 XKRXQ6PP77 449 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ZNF852Q6ZMS4 543 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ZSWIM9Q86XI8 627 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 VRK3Q8IV63 474 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 COX18Q8N8Q8 333 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 GPR150Q8NGU9 434 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 OR8K5Q8NH50 307 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 GEMIN6Q8WXD5 167 aaKnown RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 CREB3L1Q96BA8 519 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 ZMAT3Q9HA38 289 aaKnown RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 PLAC1Q9HBJ0 212 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TCF7L1Q9HCS4 588 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TMEM9Q9P0T7 183 aa7.46□□□□□ -1.22
KPNA1-201ENST00000344337 RPL36Q9Y3U8 105 aaKnown RBP7.46□□□□□ -1.22
KPNA1-201ENST00000344337 TCRBV5S1A1TA0A578 114 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 MTMR11A4FU01 709 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
KPNA1-201ENST00000344337 HSD17B1P14061 328 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 CTBP2P56545 445 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 HTRA3P83110 453 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ULK3Q6PHR2 472 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 CRTC1Q6UUV9 634 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ALKAL2Q6UX46 152 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ESPNLQ6ZVH7 1005 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 FTMTQ8N4E7 242 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 PJA1Q8NG27 643 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ORAI1Q96D31 301 aa7.45□□□□□ -1.22
KPNA1-201ENST00000344337 ZNF558Q96NG5 402 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms