RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ALAS2P22557 587 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 CASP9P55211 416 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 SLC14A1Q13336 389 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 SQSTM1Q13501 440 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 FAM53BQ14153 422 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF750Q32MQ0 723 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ZFP1Q6P2D0 407 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 MICU2Q8IYU8 434 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 SAMD14Q8IZD0 417 aaPredicted RBP16.35■□□□□ 0.21
CLDN4-201ENST00000340958 METTL27Q8N6F8 245 aaPredicted RBP16.35■□□□□ 0.21
CLDN4-201ENST00000340958 KLHL6Q8WZ60 621 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 FAM162AQ96A26 154 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 COL26A1Q96A83 441 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 REXO5Q96IC2 774 aaKnown RBP16.35■□□□□ 0.21
CLDN4-201ENST00000340958 C10orf90Q96M02 699 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF285Q96NJ3 590 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 AMDHD1Q96NU7 426 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 NDC1Q9BTX1 674 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 SLC7A5P2Q9GIP4 190 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 GLIPR2Q9H4G4 154 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 CXorf36Q9H7Y0 433 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 HCN3Q9P1Z3 774 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ARID1BQ8NFD5 2236 aaPredicted RBP16.35■□□□□ 0.21
CLDN4-201ENST00000340958 FLRT2O43155 660 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 CHST10O43529 356 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ID4P47928 161 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 XKP51811 444 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ITGA1P56199 1179 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 RAB38P57729 211 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 MLC1Q15049 377 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 RGNQ15493 299 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 PHF19Q5T6S3 580 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 LCN8Q6JVE9 175 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 TTLL10Q6ZVT0 673 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 OR4N5Q8IXE1 308 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 ENDOVQ8N8Q3 282 aaKnown RBP16.35■□□□□ 0.21
CLDN4-201ENST00000340958 RCBTB1Q8NDN9 531 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 YIPF2Q9BWQ6 316 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 CUTCQ9NTM9 273 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 STX18Q9P2W9 335 aaKnown RBP16.35■□□□□ 0.21
CLDN4-201ENST00000340958 FTSJ1Q9UET6 329 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 CES1P1Q9UKY3 287 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 AURKCQ9UQB9 309 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 PCDHGB2Q9Y5G2 931 aa16.35■□□□□ 0.21
CLDN4-201ENST00000340958 AQP12BA6NM10 295 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 NSA2O95478 260 aaKnown RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 C1QCP02747 245 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 CKMT2P17540 419 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 GGT1P19440 569 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 SDHBP21912 280 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 PSMA4P25789 261 aaKnown RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 FRKP42685 505 aaPredicted RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 PRIM2P49643 509 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 CDK9P50750 372 aaKnown RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 RHDQ02161 417 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 SLC34A1Q06495 639 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 TP53BP2Q13625 1128 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 ERICH5Q6P6B1 374 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 ZNF574Q6ZN55 896 aaPredicted RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 TMPRSS9Q7Z410 1059 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 RNF130Q86XS8 419 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 AQP12AQ8IXF9 295 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 LRRC25Q8N386 305 aaPredicted RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 DTWD1Q8N5C7 304 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 CNRIP1Q96F85 164 aaPredicted RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 RBCK1Q9BYM8 510 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 FGF21Q9NSA1 209 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 SEMA5BQ9P283 1151 aa16.34■□□□□ 0.21
CLDN4-201ENST00000340958 FAF1Q9UNN5 650 aaPredicted RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 MRPS33Q9Y291 106 aaKnown RBP16.34■□□□□ 0.21
CLDN4-201ENST00000340958 IGHV5-10-1A0A0J9YXX1 117 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 FITM1A5D6W6 292 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 MYO1GB0I1T2 1018 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 FAM227AF5H4B4 570 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 CXCR6O00574 342 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 TM4SF5O14894 197 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 RNH1P13489 461 aaKnown RBP16.33■□□□□ 0.21
CLDN4-201ENST00000340958 ANPEPP15144 967 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 CCT3P49368 545 aaKnown RBP16.33■□□□□ 0.21
CLDN4-201ENST00000340958 PRKAG1P54619 331 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 ACY1Q03154 408 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 TLDC1Q6P9B6 456 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 CALHM3Q86XJ0 350 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 OR52N2Q8NGI0 321 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 OR1L3Q8NH93 324 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 TANKQ92844 425 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 PEX11GQ96HA9 241 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 CCDC74BQ96LY2 380 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 DPH2Q9BQC3 489 aaPredicted RBP16.33■□□□□ 0.21
CLDN4-201ENST00000340958 EFHD1Q9BUP0 239 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 TMEM121BQ9BXQ6 578 aaPredicted RBP16.33■□□□□ 0.21
CLDN4-201ENST00000340958 PRDM9Q9NQV7 894 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 STOML1Q9UBI4 398 aa16.33■□□□□ 0.21
CLDN4-201ENST00000340958 DCDC2BA2VCK2 349 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 FOXS1O43638 330 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 MED26O95402 600 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 EMP3P54852 163 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 POLE2P56282 527 aa16.33■□□□□ 0.2
CLDN4-201ENST00000340958 MAT1AQ00266 395 aaKnown RBP16.33■□□□□ 0.2
CLDN4-201ENST00000340958 ID2Q02363 134 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms