RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ASIC5Q9NY37 505 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 APOBEC3BQ9UH17 382 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 IKZF2Q9UKS7 526 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 J3QRK9 145 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GNB5O14775 395 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 NDUFB5O43674 189 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GRK6P43250 576 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 FAM220AQ7Z4H9 259 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 NXPE3Q969Y0 559 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 VMP1Q96GC9 406 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TUBA1CQ9BQE3 449 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 MBNL1Q9NR56 388 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 ABCD2Q9UBJ2 740 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PEX16Q9Y5Y5 336 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM150CB9EJG8 249 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ASNA1O43681 348 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 BMP8BP34820 402 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 EIF2B2P49770 351 aaKnown RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 VBP1P61758 197 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ST3GAL4Q11206 333 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ARHGAP19Q14CB8 494 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM52BQ4KMG9 183 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CEP68Q76N32 757 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 BMP8AQ7Z5Y6 402 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ACOT4Q8N9L9 421 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CCDC115Q96NT0 180 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TBC1D17Q9HA65 648 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SBF2Q86WG5 1849 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 A0A0G2JPF8 293 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 RIIAD1A6NNX1 92 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 HNRNPCL3B7ZW38 293 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 UBXN7O94888 489 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 OR5F1O95221 314 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 FHP07954 510 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 HNRNPCL4P0DMR1 293 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 AGXTP21549 392 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SDHBP21912 280 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 FAM214AQ32MH5 1076 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 DLEU7Q6UYE1 221 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ATG14Q6ZNE5 492 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 USP43Q70EL4 1123 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 METTL25Q8N6Q8 603 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ABI3Q9P2A4 366 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CFL2Q9Y281 166 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CHURC1-FNTBB4DL54 471 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SLC6A12P48065 614 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ENTPD1P49961 510 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 NIPAL1Q6NVV3 410 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 OR8J2Q8NGG1 315 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 AP3S1Q92572 193 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 PITHD1Q9GZP4 211 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 DNAJC27Q9NZQ0 273 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CLEC3AO75596 197 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 IFI30P13284 250 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CDK5R2Q13319 367 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TCTN1Q2MV58 587 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF829Q3KNS6 432 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 BCL7AQ4VC05 210 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 MEDAGQ5VYS4 303 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SPRED1Q7Z699 444 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 LRRC25Q8N386 305 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 UBASH3BQ8TF42 649 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TRIM63Q969Q1 353 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 DPYSL5Q9BPU6 564 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ABCG4Q9H172 646 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ABCB9Q9NP78 766 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 MYNNQ9NPC7 610 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 LY75O60449 1722 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 OXSR1O95747 527 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 RHCEP18577 417 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 DRD1P21728 446 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 RPS15AP62244 130 aaKnown RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 CLCA4Q14CN2 919 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF675Q8TD23 568 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SNX33Q8WV41 574 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 GPR174Q9BXC1 333 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 WBP1LQ9NX94 342 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 GNAO1P09471 354 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 COL11A2P13942 1736 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 C4BPBP20851 252 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 PMS2P3Q13401 168 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SHHQ15465 462 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 HMGN2P46Q86SG4 172 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 DIRAS2Q96HU8 199 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 VN1R3Q9BXE9 311 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 MTHFD2LQ9H903 347 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 PRTFDC1Q9NRG1 225 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF624Q9P2J8 865 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF225Q9UK10 706 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 WNK3Q9BYP7 1800 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SNPHO15079 494 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 GMFGO60234 142 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 THEGLP0DJG4 465 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF12P17014 697 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 IL1RNP18510 177 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 TAS2R38P59533 333 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 COX10Q12887 443 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 KEAP1Q14145 624 aa5.99□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF267Q14586 743 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-202ENST00000338368 SPARTQ8N0X7 666 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms