RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 IDH3AP50213 366 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 CCL11P51671 97 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 EFNA3P52797 238 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 PLIN5Q00G26 463 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 RHDQ02161 417 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 PCOLCEQ15113 449 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 TBR1Q16650 682 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 COL28A1Q2UY09 1125 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 SLC9B1Q4ZJI4 515 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 OGFOD2Q6N063 350 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 TICAM1Q8IUC6 712 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 KBTBD2Q8IY47 623 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 ST13P4Q8IZP2 240 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 M1APQ8TC57 530 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 EXOSC8Q96B26 276 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 MTERF3Q96E29 417 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 MAELQ96JY0 434 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 EGLN2Q96KS0 407 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 IMMP1LQ96LU5 166 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 BBS4Q96RK4 519 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 CCDC28BQ9BUN5 200 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 SLC35C2Q9NQQ7 365 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 SH3BP4Q9P0V3 963 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 ENTPD4Q9Y227 616 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 KCNMB2Q9Y691 235 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 C17orf105B2RV13 164 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 TGFBR3LH3BV60 316 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 UBDO15205 165 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 POLR3GO15318 223 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 TBX19O60806 448 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 LRATO95237 230 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 SERPINA7P05543 415 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 CPMP14384 443 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 HPCAL1P37235 193 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 FEN1P39748 380 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 CLDN8P56748 225 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 SOX8P57073 446 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 TERF2Q15554 542 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 BTBD16Q32M84 506 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 C6orf163Q5TEZ5 329 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 RIPOR1Q6ZS17 1223 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 MMP21Q8N119 569 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 NATD1Q8N6N6 113 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 MORN4Q8NDC4 146 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 OR14A16Q8NHC5 309 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 CLHC1Q8NHS4 586 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 RIT1Q92963 219 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 PPWD1Q96BP3 646 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 PPCDCQ96CD2 204 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 ART5Q96L15 291 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 RILPQ96NA2 401 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 WDR77Q9BQA1 342 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 DPY30Q9C005 99 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 TCF7L2Q9NQB0 619 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 CLDN16Q9Y5I7 305 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 ACACBO00763 2458 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 IGF2RP11717 2491 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 CHD8Q9HCK8 2581 aa11.14□□□□□ -0.63
SPTLC1-202ENST00000337841 SAGE2PA6NJ88 616 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 A6NL46 340 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 GABRR3A8MPY1 467 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 IDO1P14902 403 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 NT5EP21589 574 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 ITGA3P26006 1051 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 DIO3P55073 304 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 SLC26A5P58743 744 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 GSTA3Q16772 222 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 LSM12Q3MHD2 195 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 CPTPQ5TA50 214 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 MAVSQ7Z434 540 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 LRRC25Q8N386 305 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 GALNT16Q8N428 558 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 B3GNT7Q8NFL0 401 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 PTPMT1Q8WUK0 201 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 STON2Q8WXE9 905 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 EXTL1Q92935 676 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 CHMP6Q96FZ7 201 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF764Q96H86 408 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 CRELD1Q96HD1 420 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 SENP5Q96HI0 755 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 THOC3Q96J01 351 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 OR52B2Q96RD2 323 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 ZBTB18Q99592 522 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 LHPPQ9H008 270 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 KCNK13Q9HB14 408 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 MMP25Q9NPA2 562 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 ATAD3AQ9NVI7 634 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 FGFR1OP2Q9NVK5 253 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 C5AR2Q9P296 337 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 ATP6V1HQ9UI12 483 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 DCTN4Q9UJW0 460 aa11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 EXO1Q9UQ84 846 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms