RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SZRD1Q7Z422 152 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 RNF130Q86XS8 419 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 ENDOVQ8N8Q3 282 aaKnown RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 TMEM52Q8NDY8 209 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 SUN3Q8TAQ9 357 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 COL26A1Q96A83 441 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 REXO5Q96IC2 774 aaKnown RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 CCDC74BQ96LY2 380 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 ZNF681Q96N22 645 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 DPYSL5Q9BPU6 564 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 RBCK1Q9BYM8 510 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 SIRT3Q9NTG7 399 aaPredicted RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 PDP2Q9P2J9 529 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 RAPGEFL1Q9UHV5 662 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 CACNA1HO95180 2353 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 CDX4O14627 284 aaPredicted RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 LDB3O75112 727 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 KCNK5O95279 499 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 CCT3P49368 545 aaKnown RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 FOLH1Q04609 750 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 SYT16Q17RD7 645 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 PHF19Q5T6S3 580 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 GPR155Q7Z3F1 870 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 SUMF1Q8NBK3 374 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 OR52N2Q8NGI0 321 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 NCLNQ969V3 563 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 ZNF501Q96CX3 271 aaPredicted RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 PEX11GQ96HA9 241 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 NSMCE2Q96MF7 247 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 COL25A1Q9BXS0 654 aaPredicted RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 RXFP3Q9NSD7 469 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 GPATCH2Q9NW75 528 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
CBX3-201ENST00000337620 FTSJ1Q9UET6 329 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 GMEB1Q9Y692 573 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 MAU2Q9Y6X3 613 aa13.84□□□□□ -0.19
CBX3-201ENST00000337620 MYOCOSA0A1B0GUC4 107 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 TCRBV3S1A0A5B6 114 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 AQP12BA6NM10 295 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 CXCR6O00574 342 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 C8BP07358 591 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 NUDT7P0C024 238 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 ANKRD34CP0C6C1 535 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 MSL3P1P0C860 447 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 RNH1P13489 461 aaKnown RBP13.83□□□□□ -0.2
CBX3-201ENST00000337620 ETFAP13804 333 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 ANPEPP15144 967 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 MVDP53602 400 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 EMP3P54852 163 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 C6orf120Q7Z4R8 191 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 AQP12AQ8IXF9 295 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 SAMD14Q8IZD0 417 aaPredicted RBP13.83□□□□□ -0.2
CBX3-201ENST00000337620 LRRC25Q8N386 305 aaPredicted RBP13.83□□□□□ -0.2
CBX3-201ENST00000337620 OR9A2Q8NGT5 310 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 PSMA8Q8TAA3 256 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 TANKQ92844 425 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 NDC1Q9BTX1 674 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 PRDM9Q9NQV7 894 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 SEMA3GQ9NS98 782 aa13.83□□□□□ -0.2
CBX3-201ENST00000337620 DHCR7Q9UBM7 475 aaKnown RBP13.83□□□□□ -0.2
CBX3-201ENST00000337620 ZNF749O43361 778 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 FGF17O60258 216 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 PRKAG1P54619 331 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 TP53BP2Q13625 1128 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 ERV3-1Q14264 604 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 C16orf72Q14CZ0 275 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 CEBPEQ15744 281 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 CPZQ66K79 652 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 ZFP1Q6P2D0 407 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 TMEM107Q6UX40 140 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 PACS2Q86VP3 889 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 ZZZ3Q8IYH5 903 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 ADCY4Q8NFM4 1077 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 FAM162AQ96A26 154 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 NEURL3Q96EH8 262 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 RNF31Q96EP0 1072 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 OR6C1Q96RD1 312 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 EDEM2Q9BV94 578 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 YIPF2Q9BWQ6 316 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 RAD21L1Q9H4I0 556 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 EPS8L2Q9H6S3 715 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 ZCCHC3Q9NUD5 404 aaKnown RBP13.82□□□□□ -0.2
CBX3-201ENST00000337620 FAF1Q9UNN5 650 aaPredicted RBP13.82□□□□□ -0.2
CBX3-201ENST00000337620 TMEM184BQ9Y519 407 aaPredicted RBP13.82□□□□□ -0.2
CBX3-201ENST00000337620 H0YIG0 161 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 H3BNX3 289 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 CDC123O75794 336 aaPredicted RBP13.82□□□□□ -0.2
CBX3-201ENST00000337620 GPR75O95800 540 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 PORP16435 677 aaPredicted RBP13.82□□□□□ -0.2
CBX3-201ENST00000337620 PRIM2P49643 509 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 POLE2P56282 527 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 RPS26P62854 115 aaKnown RBP13.82□□□□□ -0.2
CBX3-201ENST00000337620 ACY1Q03154 408 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 SLC34A1Q06495 639 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 VAC14Q08AM6 782 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 LTB4RQ15722 352 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 ADRM1Q16186 407 aa13.82□□□□□ -0.2
CBX3-201ENST00000337620 VMACQ2NL98 169 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms