RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SHMT2P34897 504 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 OPRL1P41146 370 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PSMA6P60900 246 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 EIF5AL1Q6IS14 154 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 ZNF551Q7Z340 670 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 COMMD6Q7Z4G1 85 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ZNF227Q86WZ6 799 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PLCZ1Q86YW0 608 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 RIT1Q92963 219 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 HSPA12BQ96MM6 686 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 NPLQ9BXD5 320 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 KCNK12Q9HB15 430 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 ARNT2Q9HBZ2 717 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 PAQR5Q9NXK6 330 aaPredicted RBP13.16□□□□□ -0.3
RTN4-202ENST00000337526 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
RTN4-202ENST00000337526 A0A0U1RQS6 177 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 MBLAC1A4D2B0 266 aaPredicted RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 ZSCAN5BA6NJL1 495 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 KHNYNO15037 678 aaKnown RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 OXSR1O95747 527 aaPredicted RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 PDHA2P29803 388 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 POU6F2P78424 691 aaPredicted RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 IRF5Q13568 498 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 TAZQ16635 292 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 DEFB134Q4QY38 66 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 PGM2L1Q6PCE3 622 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 PHC2Q8IXK0 858 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 NAGSQ8N159 534 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 TMEM19Q96HH6 336 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 HCN3Q9P1Z3 774 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 LOC100509620A0A075B734 347 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 A0A1W2PPK0 400 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 EEF1E1O43324 174 aaKnown RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 SLC6A9P48067 706 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 CRTC1Q6UUV9 634 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 CEP68Q76N32 757 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 PIWIL3Q7Z3Z3 882 aaKnown RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 GALNT7Q86SF2 657 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 ZFP41Q8N8Y5 198 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 MFSD2AQ8NA29 543 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 P2RY13Q9BPV8 354 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 DPH7Q9BTV6 452 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 GPRC5BQ9NZH0 403 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 MRPS17Q9Y2R5 130 aaKnown RBP13.15□□□□□ -0.3
RTN4-202ENST00000337526 GPR45Q9Y5Y3 372 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 SH3D21A4FU49 640 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 VEGFDO43915 354 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 RHOP08100 348 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 AGXTP21549 392 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 NFE2L1Q14494 772 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 SLC25A25Q6KCM7 469 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 SLC29A4Q7RTT9 530 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 OR8K3Q8NH51 312 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 RPLP0P6Q8NHW5 317 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 AKAP1Q92667 903 aaKnown RBP eCLIP13.15□□□□□ -0.3
RTN4-202ENST00000337526 ACTL8Q9H568 366 aa13.15□□□□□ -0.3
RTN4-202ENST00000337526 C1orf226A1L170 272 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 M0R233 179 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 TNFRSF10BO14763 440 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 OR2B3O76000 313 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 AHSA1O95433 338 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 LATS1O95835 1130 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 MLLT3P42568 568 aaPredicted RBP13.15□□□□□ -0.31
RTN4-202ENST00000337526 FPGSQ05932 587 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 CHAF1BQ13112 559 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 ELAVL3Q14576 367 aaKnown RBP13.15□□□□□ -0.31
RTN4-202ENST00000337526 KLBQ86Z14 1044 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.15□□□□□ -0.316e-6■□□□□ 8.7
RTN4-202ENST00000337526 OR52P1PQ8NH57 321 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 METTL8Q9H825 291 aaKnown RBP13.15□□□□□ -0.31
RTN4-202ENST00000337526 STUB1Q9UNE7 303 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 PCDHGA8Q9Y5G5 932 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 BACE2Q9Y5Z0 518 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 ALG5Q9Y673 324 aa13.15□□□□□ -0.31
RTN4-202ENST00000337526 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 TFAP2AP05549 437 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 CDK4P11802 303 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 MTNR1AP48039 350 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 ZXDBP98169 803 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 MAPK14Q16539 360 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 UGT3A2Q3SY77 523 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 TIGD4Q8IY51 512 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 SLC44A3Q8N4M1 653 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 PAPD5Q8NDF8 572 aaKnown RBP13.14□□□□□ -0.31
RTN4-202ENST00000337526 OR7G3Q8NG95 312 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 SH3YL1Q96HL8 342 aaPredicted RBP13.14□□□□□ -0.31
RTN4-202ENST00000337526 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
RTN4-202ENST00000337526 DCAF13Q9NV06 445 aaKnown RBP13.14□□□□□ -0.31
RTN4-202ENST00000337526 HRASLS2Q9NWW9 162 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms