RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 WDR92Q96MX6 357 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 COL21A1Q96P44 957 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 MIR1-1HGQ9H1L0 117 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 WASH6PQ9NQA3 447 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 GMPPBQ9Y5P6 360 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SYNDIG1LA6NDD5 238 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 B4DGG1 531 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 ANHXE9PGG2 379 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 M0R3H8 397 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 ZW10O43264 779 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SEMA4FO95754 770 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 ERGP11308 486 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 MATN1P21941 496 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 GRK3P35626 688 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 RFX3P48380 749 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 HEPACAMQ14CZ8 416 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 CCDC71Q8IV32 467 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 OR5T3Q8NGG3 340 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 MS4A6EQ96DS6 147 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 DOHHQ9BU89 302 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 C1QTNF7Q9BXJ2 289 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 CXorf21Q9HAI6 301 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SIRT3Q9NTG7 399 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 ERVK-18Q9QC07 812 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 STK25O00506 426 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SDC3O75056 442 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 AIFM1O95831 613 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 HNRNPA2B1P22626 353 aaKnown RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SELENOWP63302 87 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 NFATC4Q14934 902 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 IRAK1BP1Q5VVH5 260 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 OR9A2Q8NGT5 310 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 OR2L8Q8NGY9 312 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 ZG16BQ96DA0 208 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 CNRIP1Q96F85 164 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 TIMM29Q9BSF4 260 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 OR51I1Q9H343 314 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SMIM31A0A1B0GVY4 71 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 A0A1W2PPW3 197 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 INMTO95050 263 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 ATE1O95260 518 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 HTR1AP08908 422 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 CXCR2P25025 360 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 HTR1BP28222 390 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 PCGF2P35227 344 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 LSSP48449 732 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 ARHGDIAP52565 204 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 C6orf141Q5SZD1 244 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 TRIM40Q6P9F5 258 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 TAF8Q7Z7C8 310 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 PIK3C3Q8NEB9 887 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 OR4D11Q8NGI4 311 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 DNAJB8Q8NHS0 232 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 CSF3RQ99062 836 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 RAD21L1Q9H4I0 556 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 PELI2Q9HAT8 420 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 TM9SF3Q9HD45 589 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 TUBA8Q9NY65 449 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-201ENST00000336180 KLHL3Q9UH77 587 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 C3orf18Q9UK00 162 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 CARD8Q9Y2G2 431 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 ASXL3Q9C0F0 2248 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 CD247P20963 164 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 MVKQ03426 396 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 IQCCQ4KMZ1 466 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 C6orf132Q5T0Z8 1188 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 ERICH5Q6P6B1 374 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 SHQ1Q6PI26 577 aaKnown RBP11.91□□□□□ -0.5
LIMK1-201ENST00000336180 PAGE2Q7Z2X7 111 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 METTL27Q8N6F8 245 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-201ENST00000336180 STARD8Q92502 1023 aa11.91□□□□□ -0.5
LIMK1-201ENST00000336180 ZMAT5Q9UDW3 170 aaKnown RBP11.91□□□□□ -0.5
LIMK1-201ENST00000336180 RSL24D1Q9UHA3 163 aaKnown RBP11.91□□□□□ -0.5
LIMK1-201ENST00000336180 MYF5P13349 255 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 DNAJA1P31689 397 aaKnown RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 MC3RP41968 323 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 STT3AP46977 705 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 ARHGAP19Q14CB8 494 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 UBXN2BQ14CS0 331 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 MSANTD1Q6ZTZ1 278 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 VN1R4Q7Z5H5 301 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 NRROSQ86YC3 692 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 HIPK1Q86Z02 1210 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 LGI4Q8N135 537 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 C12orf43Q96C57 262 aaKnown RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 LHPPQ9H008 270 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 DMTF1Q9Y222 760 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 PRKNO60260 465 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 LDB3O75112 727 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 CDC123O75794 336 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 FADS2O95864 444 aaKnown RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 NR2F1P10589 423 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 HIST1H1TP22492 207 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-201ENST00000336180 CRHBPP24387 322 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 MAGEA2P43356 314 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 ALDH3B2P48448 385 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 ISL1P61371 349 aa11.9□□□□□ -0.5
LIMK1-201ENST00000336180 GAS6Q14393 721 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms