RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ANXA8L1Q5VT79 327 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 DLEU7Q6UYE1 221 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 RINLQ6ZS11 566 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 PRSS58Q8IYP2 241 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 SLC7A6OSQ96CW6 309 aaPredicted RBP20.2■□□□□ 0.82
TPM1-204ENST00000334895 AMDHD1Q96NU7 426 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 TRIM4Q9C037 500 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 B3GNT4Q9C0J1 378 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 SLC26A1Q9H2B4 701 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 GLIPR2Q9H4G4 154 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 BTNL2Q9UIR0 455 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 PSME2Q9UL46 239 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 ENTPD4Q9Y227 616 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 NEUROG3Q9Y4Z2 214 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 A0A1W2PRB8 838 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 VSTM2BA6NLU5 285 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 FXYD1O00168 92 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 NVLO15381 856 aaKnown RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 RECKO95980 971 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 HOXB9P17482 250 aaPredicted RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 PTGER1P34995 402 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 NUDT2P50583 147 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 HSD17B7P56937 341 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 IGLV3-21P80748 117 aaPredicted RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 RHAGQ02094 409 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 NKG7Q16617 165 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 C6orf15Q6UXA7 325 aaPredicted RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 ZNF551Q7Z340 670 aaPredicted RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 FKBP10Q96AY3 582 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 PAIP1Q9H074 479 aaKnown RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 RMND5AQ9H871 391 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 EFCAB1Q9HAE3 211 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 NECTIN3Q9NQS3 549 aa20.19■□□□□ 0.82
TPM1-204ENST00000334895 ACSS1Q9NUB1 689 aaPredicted RBP20.19■□□□□ 0.82
TPM1-204ENST00000334895 ERICH4A6NGS2 130 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 B2RBV5 119 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 CLDN4O14493 209 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 ZGLP1P0C6A0 271 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 CPMP14384 443 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 DDX5P17844 614 aaKnown RBP20.18■□□□□ 0.82
TPM1-204ENST00000334895 SLC5A2P31639 672 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 CPOXP36551 454 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 HBA1P69905 142 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 SLC13A2Q13183 592 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 GTDC1Q4AE62 458 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 MINDY4Q4G0A6 757 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 LACTB2Q53H82 288 aaPredicted RBP20.18■□□□□ 0.82
TPM1-204ENST00000334895 MLIPQ5VWP3 458 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 DNAJC14Q6Y2X3 702 aaPredicted RBP20.18■□□□□ 0.82
TPM1-204ENST00000334895 QSOX2Q6ZRP7 698 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 SHISA6Q6ZSJ9 500 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 MSRB3Q8IXL7 192 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 CCDC116Q8IYX3 515 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 NATD1Q8N6N6 113 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 RBM15BQ8NDT2 890 aaKnown RBP20.18■□□□□ 0.82
TPM1-204ENST00000334895 ITCHQ96J02 903 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 BBS4Q96RK4 519 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 SPSB2Q99619 263 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 VN1R1Q9GZP7 353 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 IL1RL2Q9HB29 575 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 MMACHCQ9Y4U1 282 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 ZNF780BQ9Y6R6 833 aa20.18■□□□□ 0.82
TPM1-204ENST00000334895 IGKV3D-11A0A0A0MRZ8 115 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 CDRT15L2A8MXV6 281 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 CPSF4O95639 269 aaKnown RBP20.17■□□□□ 0.82
TPM1-204ENST00000334895 ALBP02768 609 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 CSNK2A2P19784 350 aaPredicted RBP20.17■□□□□ 0.82
TPM1-204ENST00000334895 PPP2R1BP30154 601 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 NTSP30990 170 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 NCBP2P52298 156 aaKnown RBP eCLIP20.17■□□□□ 0.82
TPM1-204ENST00000334895 OCA2Q04671 838 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 MLC1Q15049 377 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 C6orf10Q5SRN2 563 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 LRIF1Q5T3J3 769 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 CPZQ66K79 652 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 VPS37AQ8NEZ2 397 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 GOT1L1Q8NHS2 421 aaPredicted RBP20.17■□□□□ 0.82
TPM1-204ENST00000334895 TSLPQ969D9 159 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 ZBED6CLQ96FA7 236 aaPredicted RBP20.17■□□□□ 0.82
TPM1-204ENST00000334895 SLC39A3Q9BRY0 314 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 ASCL3Q9NQ33 180 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 GIMAP4Q9NUV9 329 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 SLC25A37Q9NYZ2 338 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 PCDHGA7Q9Y5G6 932 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 AKAP13Q12802 2813 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 AHCTF1Q8WYP5 2266 aa20.17■□□□□ 0.82
TPM1-204ENST00000334895 TRBV5-3A0A0A0MS03 114 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 RFXANKO14593 260 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 GSNP06396 782 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 SOX18P35713 384 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 CDK9P50750 372 aaKnown RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 MNAT1P51948 309 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 MANFP55145 182 aaKnown RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 NCALDP61601 193 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 SLC25A3Q00325 362 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 HSPB3Q12988 150 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 NFYCQ13952 458 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 TRMT5Q32P41 509 aaKnown RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 C8orf82Q6P1X6 216 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 IGF2-ASQ6U949 168 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms