RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CSNK1G2P78368 415 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 MED22Q15528 200 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 DCST1Q5T197 706 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 TCTN3Q6NUS6 607 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 UBE3DQ7Z6J8 389 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 AMER2Q8N7J2 671 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 KBTBD8Q8NFY9 601 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 OR5D16Q8NGK9 328 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 TEFMQ96QE5 360 aaKnown RBP16.79■□□□□ 0.28
LRCH3-201ENST00000334859 TREX2Q9BQ50 279 aaPredicted RBP16.79■□□□□ 0.28
LRCH3-201ENST00000334859 UCK2Q9BZX2 261 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 SERHL2Q9H4I8 314 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 RNF167Q9H6Y7 350 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 TRPC4Q9UBN4 977 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 KCNK6Q9Y257 313 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 SH3D21A4FU49 640 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 KRBA1A5PL33 1030 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 H3BN98 237 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 KAT7O95251 611 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 H1F0P07305 194 aaKnown RBP16.79■□□□□ 0.28
LRCH3-201ENST00000334859 OR12D1P0DN82 309 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 UGT2B10P36537 528 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 IRF4Q15306 451 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 CST6Q15828 149 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 SYPL1Q16563 259 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 NDUFAF5Q5TEU4 345 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 ZNF367Q7RTV3 350 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 EGFL6Q8IUX8 553 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 FAM20CQ8IXL6 584 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 FAM46DQ8NEK8 389 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 OTUB1Q96FW1 271 aaPredicted RBP16.79■□□□□ 0.28
LRCH3-201ENST00000334859 SLC35G5Q96KT7 338 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 DPH7Q9BTV6 452 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 RSPO3Q9BXY4 272 aaPredicted RBP16.79■□□□□ 0.28
LRCH3-201ENST00000334859 MMP27Q9H306 513 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 P2RX2Q9UBL9 471 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 SERGEFQ9UGK8 458 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 ACSL5Q9ULC5 683 aa16.79■□□□□ 0.28
LRCH3-201ENST00000334859 GLOD5A6NK44 160 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 TLR4O00206 839 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 ZW10O43264 779 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 PRKRAO75569 313 aaKnown RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 PTGER1P34995 402 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 FRKP42685 505 aaPredicted RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 UGT2B15P54855 530 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 KRT33BQ14525 404 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 MLF2Q15773 248 aaPredicted RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 WDR36Q8NI36 951 aaKnown RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 XAGE5Q8WWM1 108 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 CRELD1Q96HD1 420 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 ZNF354BQ96LW1 612 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 OR5M11Q96RB7 305 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 INSM2Q96T92 566 aaPredicted RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 NEURL2Q9BR09 285 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 PITHD1Q9GZP4 211 aaPredicted RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 OR51I1Q9H343 314 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 POLE4Q9NR33 117 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 IFT52Q9Y366 437 aa16.78■□□□□ 0.28
LRCH3-201ENST00000334859 RANBP2P49792 3224 aaKnown RBP16.78■□□□□ 0.28
LRCH3-201ENST00000334859 METTL15A6NJ78 407 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 UGT2B17O75795 530 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 PAK4O96013 591 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 IGFBP1P08833 259 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 NR2F1P10589 423 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 GJA4P35212 333 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 IRF3Q14653 427 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 C9orf43Q8TAL5 461 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 PHOSPHO2Q8TCD6 241 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 ARMC5Q96C12 935 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 MACROD1Q9BQ69 325 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 CENPOQ9BU64 300 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 TEX101Q9BY14 249 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 NT5DC2Q9H857 520 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 ACSS1Q9NUB1 689 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 ZCCHC3Q9NUD5 404 aaKnown RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 CNOT2Q9NZN8 540 aaKnown RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 ADAM29Q9UKF5 820 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 DNMT3AQ9Y6K1 912 aaPredicted RBP16.77■□□□□ 0.28
LRCH3-201ENST00000334859 DSPPQ9NZW4 1301 aa16.77■□□□□ 0.28
LRCH3-201ENST00000334859 IGKV1-8A0A0C4DH67 115 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 WASHC1A8K0Z3 465 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 FAAHO00519 579 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 SERPINB7O75635 380 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 ADRA2AP08913 450 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 OSMP13725 252 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 CD40LGP29965 261 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 PPP2R1BP30154 601 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 KCNJ5P48544 419 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 RAB28P51157 221 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 NCBP2P52298 156 aaKnown RBP eCLIP16.77■□□□□ 0.273e-12■□□□□ 9.7
LRCH3-201ENST00000334859 WASH2PQ6VEQ5 465 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 PLEKHG7Q6ZR37 379 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 LACC1Q8IV20 430 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 HDDC3Q8N4P3 179 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 OR4D11Q8NGI4 311 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 RASSF5Q8WWW0 418 aa16.77■□□□□ 0.27
LRCH3-201ENST00000334859 HERVK_113Q902F9 699 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms