RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 GSTM5P46439 218 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 SERPINB4P48594 390 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 MLF1P58340 268 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 CASP8Q14790 479 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 HEPACAMQ14CZ8 416 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 INPP5JQ15735 1006 aaPredicted RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 CLEC6AQ6EIG7 209 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 BEST3Q8N1M1 668 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 PPWD1Q96BP3 646 aaKnown RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 APIPQ96GX9 242 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 ART5Q96L15 291 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 TNFRSF12AQ9NP84 129 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 ARGLU1Q9NWB6 273 aaPredicted RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 LUZP4Q9P127 313 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 CSAG2Q9Y5P2 127 aa13.06□□□□□ -0.32
LIMS1-201ENST00000332345 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
LIMS1-201ENST00000332345 RSL1D1O76021 490 aaKnown RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 DDAH2O95865 285 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 F10P00742 488 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 ANXA4P09525 319 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 DRD2P14416 443 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 PORP16435 677 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 CD96P40200 585 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 XKP51811 444 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 RAE1P78406 368 aaKnown RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 OC90Q02509 493 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 FAM219BQ5XKK7 198 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 SLC48A1Q6P1K1 146 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 RNF165Q6ZSG1 346 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 ZCCHC23Q6ZST2 131 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 ARMC10Q8N2F6 343 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 CISD2Q8N5K1 135 aaKnown RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 OR8K3Q8NH51 312 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 RIT1Q92963 219 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 UCN3Q969E3 161 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 NPAS2Q99743 824 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 MAP10Q9P2G4 905 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 FIS1Q9Y3D6 152 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 COPG1Q9Y678 874 aaKnown RBP13.05□□□□□ -0.32
LIMS1-201ENST00000332345 ZNF780BQ9Y6R6 833 aa13.05□□□□□ -0.32
LIMS1-201ENST00000332345 PRRC2CQ9Y520 2896 aaKnown RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 GABRR3A8MPY1 467 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 PRAMEF2O60811 474 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 SEC22BO75396 215 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 CHRNGP07510 517 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 GRK2P25098 689 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 TIA1P31483 386 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 TUBA3CQ13748 450 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 ZNF267Q14586 743 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 SH2D4BQ5SQS7 431 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 HHATQ5VTY9 493 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 TUBA3EQ6PEY2 450 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 SAMD14Q8IZD0 417 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 OR6Y1Q8NGX8 325 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 ZNF721Q8TF20 911 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 C16orf78Q8WTQ4 265 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 THAP3Q8WTV1 239 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 SNRNP40Q96DI7 357 aaKnown RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 C11orf24Q96F05 449 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 FBXL20Q96IG2 436 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 CCT7Q99832 543 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 PAIP2Q9BPZ3 127 aaKnown RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 TMBIM4Q9HC24 238 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 AGPAT4Q9NRZ5 378 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 CES1P1Q9UKY3 287 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 YARS2Q9Y2Z4 477 aaKnown RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 PCDHGB6Q9Y5F9 930 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 DNAJC15Q9Y5T4 150 aa13.04□□□□□ -0.32
LIMS1-201ENST00000332345 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-201ENST00000332345 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 MAN1A2O60476 641 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 VPS4BO75351 444 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 ERAL1O75616 437 aaKnown RBP13.03□□□□□ -0.32
LIMS1-201ENST00000332345 WISP1O95388 367 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 SERPINE1P05121 402 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 LINC00032P0C843 101 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 DHRS4L1P0CG22 281 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 CPMP14384 443 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 CD46P15529 392 aa13.03□□□□□ -0.32
LIMS1-201ENST00000332345 CSNK2A2P19784 350 aaPredicted RBP13.03□□□□□ -0.32
LIMS1-201ENST00000332345 PRPH2P23942 346 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms