RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ADAP2Q9NPF8 381 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 SNX15Q9NRS6 342 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 STMN3Q9NZ72 180 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 NINJ2Q9NZG7 142 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PTGFRNQ9P2B2 879 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ZNF490Q9ULM2 529 aaPredicted RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 DAPP1Q9UN19 280 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 NTNG1Q9Y2I2 539 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ATMQ13315 3056 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TLN1Q9Y490 2541 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 A0A087WUV0 522 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 A0A096LPK6 155 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 A0A1B0GUH1 482 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 NCF1BA6NI72 391 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 NCF1CA8MVU1 366 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 SUPT3HB4E1H0 165 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 C4orf51C9J302 202 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 FOXE1O00358 373 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 CYR61O00622 381 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 FFAR3O14843 346 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 GPR42O15529 346 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 CCNT2O60583 730 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 CTNSO60931 367 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 SUPT3HO75486 399 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 FAM155BO75949 473 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 SEMA3DO95025 777 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 AGFG2O95081 481 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 RASAL1O95294 804 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 LDLRP01130 860 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 ALDOAP04075 364 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 SERPIND1P05546 499 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 INHBAP08476 426 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 NCF1P14598 390 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 CD22P20273 847 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TYK2P29597 1187 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 ECHS1P30084 290 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 PPP2R1BP30154 601 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 GALNSP34059 522 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 UQCRFS1P47985 274 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 MLF1P58340 268 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 NAA20P61599 178 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 BTN3A2P78410 334 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 IGLV3-21P80748 117 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 MRPS25P82663 173 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 SLC7A5Q01650 507 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 ZNF33BQ06732 778 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TBL3Q12788 808 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 CUL3Q13618 768 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TUBA3CQ13748 450 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 RUNX2Q13950 521 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TRADDQ15628 312 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 ELAVL1Q15717 326 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 GGTA1PQ4G0N0 100 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 KRTCAP3Q53RY4 240 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TECRLQ5HYJ1 363 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 LGSNQ5TDP6 509 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TUBA3EQ6PEY2 450 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TIFABQ6ZNK6 161 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 LINC00696Q6ZRV3 163 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 TRMT10CQ7L0Y3 403 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 CMC1Q7Z7K0 106 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 C17orf53Q8N3J3 647 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 TMEM132CQ8N3T6 1108 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 SIRT6Q8N6T7 355 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 POGLUT1Q8NBL1 392 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 FAM98AQ8NCA5 519 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 APCDD1LQ8NCL9 501 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 MORN4Q8NDC4 146 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 B3GNT7Q8NFL0 401 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 OR7G3Q8NG95 312 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 OR5T3Q8NGG3 340 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 THAP3Q8WTV1 239 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 RNF141Q8WVD5 230 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMG1-201ENST00000330588 DAZLQ92904 295 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 NXNL1Q96CM4 212 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 MTBPQ96DY7 904 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 C19orf60Q96EN9 201 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 VMP1Q96GC9 406 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 CNDP1Q96KN2 507 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 Q96M66 194 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 PTCHD1Q96NR3 888 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 GPR78Q96P69 363 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 MESP1Q9BRJ9 268 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 UTP23Q9BRU9 249 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 PELOQ9BRX2 385 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 NTMT1Q9BV86 223 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 CDC42EP4Q9H3Q1 356 aaKnown RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 KLHL31Q9H511 634 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 COPS7BQ9H9Q2 264 aaPredicted RBP5.91□□□□□ -1.46
SMG1-201ENST00000330588 MED4Q9NPJ6 270 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 PRTFDC1Q9NRG1 225 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 OLAHQ9NV23 265 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 KCMF1Q9P0J7 381 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 PHF11Q9UIL8 331 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 CLDN16Q9Y5I7 305 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 CSAG2Q9Y5P2 127 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 IKBKGQ9Y6K9 419 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 SPACA6W5XKT8 324 aa5.91□□□□□ -1.46
SMG1-201ENST00000330588 SCN2AQ99250 2005 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms