RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SH3BP5O60239 455 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 SEMA7AO75326 666 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 OXSR1O95747 527 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 TNFSF8P32971 234 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 SOX3P41225 446 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 MAPK12P53778 367 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 MEDAGQ5VYS4 303 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 SLX4IPQ5VYV7 408 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 LCTLQ6UWM7 567 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 GRASPQ7Z6J2 395 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 KRT73Q86Y46 540 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ADGRF3Q8IZF5 1079 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 SLC34A3Q8N130 599 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 FLCNQ8NFG4 579 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 RAB8BQ92930 207 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 NUS1Q96E22 293 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 TMEM80Q96HE8 168 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 PPP1R16AQ96I34 528 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 LINC00615Q96LM1 132 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 RSPO3Q9BXY4 272 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 HOXD1Q9GZZ0 328 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 C3orf14Q9HBI5 128 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 C14orf119Q9NWQ9 140 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 CLEC2DQ9UHP7 191 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 PLAGL1Q9UM63 463 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ASF1AQ9Y294 204 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 LSM2Q9Y333 95 aaKnown RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 MYO9BQ13459 2157 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 H3BN98 237 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 RTCAO00442 366 aaKnown RBP14.58□□□□□ -0.07
BRCC3-201ENST00000330045 FAAHO00519 579 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 PDPK1O15530 556 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 SPINT1O43278 529 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 CSO75390 466 aaKnown RBP14.58□□□□□ -0.07
BRCC3-201ENST00000330045 PDE9AO76083 593 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 RPS19P39019 145 aaKnown RBP14.58□□□□□ -0.07
BRCC3-201ENST00000330045 PBX2P40425 430 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 XKP51811 444 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 NCF4Q15080 339 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 SPHARQ15513 63 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 TMEM201Q5SNT2 666 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 CASP12Q6UXS9 341 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 DEF8Q6ZN54 512 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 CELF2-AS1Q8N7Q2 184 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 CHAC2Q8WUX2 184 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 TM4SF18Q96CE8 201 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 ZNF514Q96K75 400 aaPredicted RBP14.58□□□□□ -0.07
BRCC3-201ENST00000330045 ABCG4Q9H172 646 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 SMURF1Q9HCE7 757 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 DYRK4Q9NR20 520 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 FBXL12Q9NXK8 326 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 MARK1Q9P0L2 795 aa14.58□□□□□ -0.07
BRCC3-201ENST00000330045 LRRK1Q38SD2 2015 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 MMP20O60882 483 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 PAPLNO95428 1278 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 H1F0P07305 194 aaKnown RBP14.58□□□□□ -0.08
BRCC3-201ENST00000330045 C12orf73Q69YU5 71 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 GDPGP1Q6ZNW5 385 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 SPATC1Q76KD6 591 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 C6orf120Q7Z4R8 191 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 TRIM69Q86WT6 500 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 NATD1Q8N6N6 113 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 IL17RDQ8NFM7 739 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 OR2L2Q8NH16 312 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 VANGL1Q8TAA9 524 aaPredicted RBP14.58□□□□□ -0.08
BRCC3-201ENST00000330045 RAD51AP1Q96B01 352 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 TEFMQ96QE5 360 aaKnown RBP14.58□□□□□ -0.08
BRCC3-201ENST00000330045 KLHL3Q9UH77 587 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 TRAPPC4Q9Y296 219 aa14.58□□□□□ -0.08
BRCC3-201ENST00000330045 RPL36Q9Y3U8 105 aaKnown RBP14.58□□□□□ -0.08
BRCC3-201ENST00000330045 RGS5O15539 181 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 SLITRK5O94991 958 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 TBX6O95947 436 aaPredicted RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 RB1P06400 928 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 PSMA1P25786 263 aaKnown RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 EPHA5P54756 1037 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 ST8SIA6P61647 398 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 CNTN1Q12860 1018 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 HSPB3Q12988 150 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 HEPACAMQ14CZ8 416 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 SPDYE7PQ495Y7 208 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 CCDC92Q53HC0 331 aaPredicted RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 KHDRBS2Q5VWX1 349 aaKnown RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 RBM45Q8IUH3 476 aaKnown RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 OR8H2Q8N162 312 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 OR5AR1Q8NGP9 310 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 DHRS1Q96LJ7 313 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 ZNF354BQ96LW1 612 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 F2RL3Q96RI0 385 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 ZNF717Q9BY31 904 aaPredicted RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 RACGAP1Q9H0H5 632 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 POLR2J3Q9H1A7 115 aaKnown RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 NEUROD4Q9HD90 331 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 NINQ8N4C6 2090 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 HMGN4O00479 90 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 FGF19O95750 216 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 PTPN2P17706 415 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 ENDOUP21128 410 aaKnown RBP14.57□□□□□ -0.08
BRCC3-201ENST00000330045 OPRD1P41143 372 aa14.57□□□□□ -0.08
BRCC3-201ENST00000330045 KCNJ5P48544 419 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms