RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 ITPKBP27987 946 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 GALNSP34059 522 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 STT3AP46977 705 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 ARFIP2P53365 341 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 GYS2P54840 703 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 CLDN8P56748 225 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 FOXL2P58012 376 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 IGLV3-21P80748 117 aaPredicted RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 EEF1A2Q05639 463 aaKnown RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 SRSF6Q13247 344 aaKnown RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 DPY19L1Q2PZI1 675 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 CPTPQ5TA50 214 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 METTL21CQ5VZV1 264 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 KIRREL2Q6UWL6 708 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 TICAM1Q8IUC6 712 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 LRRC25Q8N386 305 aaPredicted RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 GLB1L3Q8NCI6 653 aaPredicted RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 OR11G2Q8NGC1 345 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 CLHC1Q8NHS4 586 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 ZFP28Q8NHY6 868 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 TSLPQ969D9 159 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 EXOSC8Q96B26 276 aaKnown RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 ANKRD9Q96BM1 317 aaPredicted RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 THOC1Q96FV9 657 aaKnown RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 ART5Q96L15 291 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 OR52B2Q96RD2 323 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 ATP13A2Q9NQ11 1180 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 PNO1Q9NRX1 252 aaKnown RBP13.2□□□□□ -0.3
CMTM1-201ENST00000328020 AIG1Q9NVV5 245 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 SH3BP4Q9P0V3 963 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 HEY2Q9UBP5 337 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 FBXL4Q9UKA2 621 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 CES1P1Q9UKY3 287 aa13.2□□□□□ -0.3
CMTM1-201ENST00000328020 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 OR2W5A6NFC9 320 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 SRRM3A6NNA2 597 aaPredicted RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 E9PBE3 544 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 SCAMP2O15127 329 aaKnown RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 PRKRAO75569 313 aaKnown RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 SLITRK5O94991 958 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 LRATO95237 230 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 FURINP09958 794 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 CPMP14384 443 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 WT1P19544 449 aaPredicted RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 DIO3P55073 304 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 C21orf58P58505 322 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 CXADRP78310 365 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 ID2Q02363 134 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 SRSF11Q05519 484 aaKnown RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 ATP1A4Q13733 1029 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 PTGR1Q14914 329 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 DEFB109BQ30KR1 87 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 TMEM151BQ8IW70 566 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 OR4N5Q8IXE1 308 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 MIER2Q8N344 545 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 VPS37AQ8NEZ2 397 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 RFWD2Q8NHY2 731 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 RIT1Q92963 219 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 GFM2Q969S9 779 aaKnown RBP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 C8orf44Q96CB5 159 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 EGLN2Q96KS0 407 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 CNTNAP3BQ96NU0 1288 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 TMEM120AQ9BXJ8 343 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 CNTNAP3Q9BZ76 1288 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.19□□□□□ -0.3
CMTM1-201ENST00000328020 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 ATP6V1HQ9UI12 483 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 EPG5Q9HCE0 2579 aa13.19□□□□□ -0.3
CMTM1-201ENST00000328020 CELSR3Q9NYQ7 3312 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 SAGE2PA6NJ88 616 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 C17orf105B2RV13 164 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 PDPK1O15530 556 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 SLC22A3O75751 556 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 ITGB2P05107 769 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 COX6A1P12074 109 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 NCF2P19878 526 aaPredicted RBP13.18□□□□□ -0.3
CMTM1-201ENST00000328020 FEN1P39748 380 aaKnown RBP13.18□□□□□ -0.3
CMTM1-201ENST00000328020 PDE7AQ13946 482 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 ST3GAL2Q16842 350 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 PDCD4Q53EL6 469 aaKnown RBP13.18□□□□□ -0.3
CMTM1-201ENST00000328020 DCAF10Q5QP82 559 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 RIPOR1Q6ZS17 1223 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 KBTBD2Q8IY47 623 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 M1APQ8TC57 530 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 SNRNP27Q8WVK2 155 aaKnown RBP13.18□□□□□ -0.3
CMTM1-201ENST00000328020 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
CMTM1-201ENST00000328020 ZBED6CLQ96FA7 236 aaPredicted RBP13.18□□□□□ -0.3
CMTM1-201ENST00000328020 EBF4Q9BQW3 602 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms