RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SRSF11Q05519 484 aaKnown RBP14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 MAPRE2Q15555 327 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 NKG7Q16617 165 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 ANGPTL8Q6UXH0 198 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 RINLQ6ZS11 566 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 SIMC1Q8NDZ2 872 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 KAT2AQ92830 837 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 ANKRD9Q96BM1 317 aaPredicted RBP14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 NSL1Q96IY1 281 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 VN1R1Q9GZP7 353 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 GLIPR2Q9H4G4 154 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 MKKSQ9NPJ1 570 aaPredicted RBP14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 ENAMQ9NRM1 1142 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 PACSIN3Q9UKS6 424 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 ANKRD65E5RJM6 399 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 RFXANKO14593 260 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 NVLO15381 856 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 CCNYL3P0C7X3 344 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 SDHBP21912 280 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 NTSP30990 170 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 NFYCQ13952 458 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 NSDHLQ15738 373 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 FAM198BQ6UWH4 519 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 DGAT2L6Q6ZPD8 337 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 ENDOVQ8N8Q3 282 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 OR8J2Q8NGG1 315 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 STARD8Q92502 1023 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 C8orf44Q96CB5 159 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 COQ8BQ96D53 544 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 ZPBPQ9BS86 351 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 ALOXE3Q9BYJ1 711 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 PNO1Q9NRX1 252 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 PADI1Q9ULC6 663 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 PCDHGA8Q9Y5G5 932 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 MRPS18BQ9Y676 258 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 TRABD2BA6NFA1 517 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 IDSB3KWA1 339 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 C9J4A7 227 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 OR10H2O60403 315 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 RPL3P39023 403 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 MRPL19P49406 292 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 CDK9P50750 372 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 PGDP52209 483 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 KRT72Q14CN4 511 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 TLR1Q15399 786 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 DPY19L1Q2PZI1 675 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF621Q6ZSS3 439 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 OVCH1Q7RTY7 1134 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 SUN3Q8TAQ9 357 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 GTF2H4Q92759 462 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 BHLHE41Q9C0J9 482 aaPredicted RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 SERHLQ9NQF3 203 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 GIMAP4Q9NUV9 329 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 MAP10Q9P2G4 905 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 PSME2Q9UL46 239 aa14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 PTRH2Q9Y3E5 179 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-202ENST00000318007 B2RBV5 119 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 STMND1H3BQB6 276 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 SLC22A2O15244 555 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 SCN2BO60939 215 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 DLGAP3O95886 979 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 HEXBP07686 556 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 NT5EP21589 574 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 CALB2P22676 271 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 ADSLP30566 484 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 GSTM5P46439 218 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 PRKAG1P54619 331 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 STX5Q13190 355 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 ART3Q13508 389 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 NCF4Q15080 339 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF595Q8IYB9 648 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 LRRC25Q8N386 305 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 IL22RA1Q8N6P7 574 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 CT55Q8WUE5 264 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 TANKQ92844 425 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 MTERF3Q96E29 417 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 OTUB1Q96FW1 271 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 AMDHD1Q96NU7 426 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 SPSB2Q99619 263 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 CRB3Q9BUF7 120 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 PIF1Q9H611 641 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 MRGBPQ9NV56 204 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 EHD3Q9NZN3 535 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 LEF1Q9UJU2 399 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 C3orf18Q9UK00 162 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 CROTQ9UKG9 612 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 PCDHGA3Q9Y5H0 932 aa14.44□□□□□ -0.1
PDLIM5-202ENST00000318007 PRSS51A0A1B0GVH4 220 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 HRKO00198 91 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 GPR75O95800 540 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 CPMP14384 443 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 MC3RP41968 323 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 C21orf58P58505 322 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 GAB1Q13480 694 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 CAMK2BQ13554 666 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 MAP7Q14244 749 aa14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 PUM1Q14671 1186 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF771Q7L3S4 317 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-202ENST00000318007 DHDDSQ86SQ9 333 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms