RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MMP2P08253 660 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 HOXC4P09017 264 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ALDOCP09972 364 aaKnown RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 NUDT7P0C024 238 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 CKBP12277 381 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 NCF1P14598 390 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RHCEP18577 417 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 C4BPBP20851 252 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 PCSK1P29120 753 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GNALP38405 381 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 LILRA4P59901 499 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 C1QTNF8P60827 252 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 BTG1P62324 171 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TNFRSF17Q02223 184 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SGCGQ13326 291 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 DGKZQ13574 1117 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 GK2Q14410 553 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MAD2L1BPQ15013 274 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TIMM50Q3ZCQ8 353 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SAPCD1Q5SSQ6 148 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ATG9BQ674R7 924 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SCIMPQ6UWF3 145 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 LRRC8DQ7L1W4 858 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 REC114Q7Z4M0 266 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 LHFPL3Q86UP9 236 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 KLBQ86Z14 1044 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 THEM5Q8N1Q8 247 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF454Q8N9F8 522 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 COQ8AQ8NI60 647 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF675Q8TD23 568 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 KIAA1143Q96AT1 154 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 MS4A3Q96HJ5 214 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 FUBP3Q96I24 572 aaKnown RBP eCLIP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RAD9AQ99638 391 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 C2orf88Q9BSF0 95 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 RNF32Q9H0A6 362 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 NXF3Q9H4D5 531 aaKnown RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 SLC28A3Q9HAS3 691 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 TMEFF2Q9UIK5 374 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 PHF11Q9UIL8 331 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 FIS1Q9Y3D6 152 aa6.35□□□□□ -1.39
ZNF540-201ENST00000316433 DNMT3AQ9Y6K1 912 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-201ENST00000316433 LOC102723532A0A0G2JNH3 316 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ASPDHA6ND91 283 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 E9PI62 339 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 LZTS3O60299 673 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 UBXN7O94888 489 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 CST1P01037 141 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ATXN1LP0C7T5 689 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 MTHFD2P13995 350 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 DPEP1P16444 411 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF37AP17032 561 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PIK3CGP48736 1102 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 TAS2R39P59534 338 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 RAB5BP61020 215 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 IL10RBQ08334 325 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ELP6Q0PNE2 266 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 MAD2L1Q13257 205 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 CAMK2DQ13557 499 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 RAB33AQ14088 237 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 OPCMLQ14982 345 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 VPS26BQ4G0F5 336 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 AKIRIN2Q53H80 203 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 LBHQ53QV2 105 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 RABL3Q5HYI8 236 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 C19orf48Q6RUI8 117 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PID1Q7Z2X4 250 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 UXS1Q8NBZ7 420 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 TRMT10AQ8TBZ6 339 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 GPR152Q8TDT2 470 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ZDHHC1Q8WTX9 485 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 CRELD1Q96HD1 420 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PARK7Q99497 189 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 AARSD1Q9BTE6 412 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 NT5DC2Q9H857 520 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PDFQ9HBH1 243 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 C11orf16Q9NQ32 467 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 NUDT4Q9NZJ9 180 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 SH3BP4Q9P0V3 963 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 GJD2Q9UKL4 321 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 NDRG2Q9UN36 371 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 FZD1Q9UP38 647 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 DLGAP4Q9Y2H0 992 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ACOD1A6NK06 481 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 ARHGEF33A8MVX0 844 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 UBFD1O14562 309 aaKnown RBP6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PPEF2O14830 753 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 AZIN1O14977 448 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 MED6O75586 246 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 LATS1O95835 1130 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 GLUD1P00367 558 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 HCKP08631 526 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PFKLP17858 780 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 PRKACGP22612 351 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 MAN2A2P49641 1150 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 RBP2P50120 134 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 GZMMP51124 257 aa6.34□□□□□ -1.39
ZNF540-201ENST00000316433 RORCP51449 518 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms