RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 NMRAL1Q9HBL8 299 aa16.1■□□□□ 0.17
EXOSC4-201ENST00000316052 PRM3Q9NNZ6 103 aa16.1■□□□□ 0.17
EXOSC4-201ENST00000316052 OPTCQ9UBM4 332 aa16.1■□□□□ 0.17
EXOSC4-201ENST00000316052 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
EXOSC4-201ENST00000316052 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.1■□□□□ 0.17
EXOSC4-201ENST00000316052 NAV3Q8IVL0 2385 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 FAM187AA6NFU0 413 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 FIGNL2A6NMB9 653 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 SUPT3HB4E1H0 165 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 KERAO60938 352 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 SUPT3HO75486 399 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 MTHFD2P13995 350 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 COX7A2P14406 83 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 ZFP36L2P47974 494 aaKnown RBP16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 MAN2A2P49641 1150 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 DDX39BQ13838 428 aaKnown RBP16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 RAPH1Q70E73 1250 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 GPR180Q86V85 440 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 TEX9Q8N6V9 391 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 PAQR8Q8TEZ7 354 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 NRGNQ92686 78 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 TANKQ92844 425 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 RGMAQ96B86 450 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 NXNL1Q96CM4 212 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 TRIM44Q96DX7 344 aaPredicted RBP16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 RBM18Q96H35 190 aaKnown RBP16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 LDAHQ9H6V9 325 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 SPRR3Q9UBC9 169 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 KCNN3Q9UGI6 736 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 VPS13CQ709C8 3753 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 MED12Q93074 2177 aa16.09■□□□□ 0.17
EXOSC4-201ENST00000316052 PLPP1O14494 284 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 GSTA2P09210 222 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 LTA4HP09960 611 aaKnown RBP16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 SERPINB1P30740 379 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 SLMAPQ14BN4 828 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 TRADDQ15628 312 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 PRAMEF20Q5VT98 475 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 GRHL2Q6ISB3 625 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 UCN3Q969E3 161 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 SPACA9Q96E40 222 aaPredicted RBP16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 FBXL20Q96IG2 436 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 MTERF1Q99551 399 aaKnown RBP16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 ZNF717Q9BY31 904 aaPredicted RBP16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 DMRT3Q9NQL9 472 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 MS4A12Q9NXJ0 267 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
EXOSC4-201ENST00000316052 TRGV5A0A0B4J1U4 118 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 LRRC14BA6NHZ5 514 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 LRRC3CA6NJW4 275 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 PROM1O43490 865 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 HCN1O60741 890 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 WDR1O75083 606 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 EEDO75530 441 aaKnown RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ALOX15P16050 662 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 EPB42P16452 691 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 CRABP2P29373 138 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 PIK3CBP42338 1070 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 RAP1GDS1P52306 607 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 PLTPP55058 493 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 RPS13P62277 151 aaKnown RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 HERVK_113P63132 956 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ERVK-8P63133 956 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 TNFRSF17Q02223 184 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 MYBPHQ13203 477 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 BIKQ13323 160 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ZNF267Q14586 743 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 C1orf185Q5T7R7 199 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 WLSQ5T9L3 541 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 CES4AQ5XG92 561 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 MRM1Q6IN84 353 aaKnown RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 TBC1D1Q86TI0 1168 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 TMEM200AQ86VY9 491 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ST13P4Q8IZP2 240 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 CENPLQ8N0S6 344 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 CLYBLQ8N0X4 340 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ZCCHC7Q8N3Z6 543 aaKnown RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC15A4Q8N697 577 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 C7orf57Q8NEG2 295 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 OR10G3Q8NGC4 313 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 SLC22A8Q8TCC7 542 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 FBF1Q8TES7 1133 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 KCTD4Q8WVF5 259 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 SARAFQ96BY9 339 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ERVK-6Q9BXR3 956 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 EXO5Q9H790 373 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ZNF703Q9H7S9 590 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ZFP64Q9NPA5 681 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ADGRE2Q9UHX3 823 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ERVK-19Q9WJR5 959 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 ASB4Q9Y574 426 aa16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 CHCHD2Q9Y6H1 151 aaPredicted RBP16.07■□□□□ 0.16
EXOSC4-201ENST00000316052 A0A1W2PR48 441 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 GLOD5A6NK44 160 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 TMPRSS11DO60235 418 aa16.06■□□□□ 0.16
EXOSC4-201ENST00000316052 LRATO95237 230 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms