RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SEC14L3Q9UDX4 400 aa13.53□□□□□ -0.24
PPP1CA-201ENST00000312989 MANBAO00462 879 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNHIT1O43257 154 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 PLIN3O60664 434 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 KLK1P06870 262 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 CT62P0C5K7 136 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 BUD31P41223 144 aaPredicted RBP13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 SSR4P51571 173 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 SLC37A1P57057 533 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 RAE1P78406 368 aaKnown RBP13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 PLIN5Q00G26 463 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 DUSP2Q05923 314 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 IFT88Q13099 833 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 MAPKAPK3Q16644 382 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNF750Q32MQ0 723 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 SGO1Q5FBB7 561 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 GFRALQ6UXV0 394 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ZYG11AQ6WRX3 759 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 Q6ZPB1 254 aaPredicted RBP13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 CYP4Z2PQ8N1L4 340 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 HORMAD2Q8N7B1 307 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 CDYL2Q8N8U2 506 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNF441Q8N8Z8 693 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 C16orf52Q8NHV5 167 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 NUBPLQ8TB37 319 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 AGAP11Q8TF27 550 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 SELENOMQ8WWX9 145 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.52□□□□□ -0.256e-6■■■■■ 28.1
PPP1CA-201ENST00000312989 DGAT2Q96PD7 388 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 KCNA7Q96RP8 456 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ACPTQ9BZG2 426 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ELOVL6Q9H5J4 265 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ICE1Q9Y2F5 2266 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
PPP1CA-201ENST00000312989 ARHGAP10A1A4S6 786 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 A1L4Q6 167 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 GLRA3O75311 464 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 NUDT17P0C025 328 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SLC35E2P0CK97 266 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 TAC1P20366 129 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 S1PR1P21453 382 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 GALNSP34059 522 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 ARL1P40616 181 aaPredicted RBP13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 CA7P43166 264 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 ERVK-8P63133 956 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 HSF1Q00613 529 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SLC18A2Q05940 514 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 MGAT2Q10469 447 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 LCP2Q13094 533 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 EBPQ15125 230 aaKnown RBP13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 MPEG1Q2M385 716 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 PIGGQ5H8A4 983 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 NDUFAF5Q5TEU4 345 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 OR52E8Q6IFG1 317 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 CYP20A1Q6UW02 462 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 GPRIN3Q6ZVF9 776 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SLC22A9Q8IVM8 553 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 GPALPP1Q8IXQ4 340 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 PSD4Q8NDX1 1056 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 OR2W6PQ8NHA6 318 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 AENQ8WTP8 325 aaKnown RBP13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 CHTF18Q8WVB6 975 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 UBLCP1Q8WVY7 318 aaPredicted RBP13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 TM4SF18Q96CE8 201 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 CCDC77Q9BR77 488 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 PPCSQ9HAB8 311 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 DCDC2Q9UHG0 476 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SNX6Q9UNH7 406 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SLC12A4Q9UP95 1085 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 ERVK-19Q9WJR5 959 aa13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SPTBN1Q01082 2364 aaKnown RBP13.51□□□□□ -0.25
PPP1CA-201ENST00000312989 SERTM1A2A2V5 107 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 NPIPA5E9PKD4 350 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 PEX1O43933 1283 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNF500O60304 480 aaPredicted RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 ZG16O60844 167 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 HSD3B1P14060 373 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNF24P17028 368 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 TNNI3P19429 210 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 HSD3B2P26439 372 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 TLX1P31314 330 aaPredicted RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 CRHR1P34998 444 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 RFC3P40938 356 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 MEOX1P50221 254 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 GPR85P60893 370 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 ALDH6A1Q02252 535 aaKnown RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 DUSP8Q13202 625 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 BIKQ13323 160 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 ZNF791Q3KP31 576 aaPredicted RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 CMPK2Q5EBM0 449 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 SLC48A1Q6P1K1 146 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 TMEM156Q8N614 296 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 C1orf52Q8N6N3 182 aaKnown RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 C7orf57Q8NEG2 295 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 NPIPA1Q9UND3 350 aa13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 KLF13Q9Y2Y9 288 aaPredicted RBP13.5□□□□□ -0.25
PPP1CA-201ENST00000312989 PCDHA9Q9Y5H5 950 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms