RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TRPV4Q9HBA0 871 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SPTA1P02549 2419 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CSF3P09919 207 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SELENOWP63302 87 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 GNMTQ14749 295 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 FAM180AQ6UWF9 173 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 GPER1Q99527 375 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TIGARQ9NQ88 270 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 EIF3KQ9UBQ5 218 aaKnown RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 C17orf113A0A1B0GUU1 675 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MROH6A6NGR9 719 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ANKRD28O15084 1053 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 PAK4O96013 591 aaPredicted RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 STSP08842 583 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 NDUFV2P19404 249 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SP3Q02447 781 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SERTAD2Q14140 314 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF805Q5CZA5 627 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ATAT1Q5SQI0 421 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ARL9Q6T311 187 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM205Q6UW68 189 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 GALNT5Q7Z7M9 940 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CLEC14AQ86T13 490 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 LFNGQ8NES3 379 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TPK1Q9H3S4 243 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 PCTPQ9UKL6 214 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ADAMTS6Q9UKP5 1117 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MRPS7Q9Y2R9 242 aaKnown RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 HSPB11Q9Y547 144 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CIB4A0PJX0 185 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CXorf49A8MYA2 514 aaPredicted RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SMLR1H3BR10 107 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 LY86O95711 162 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 AMD1P17707 334 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CHMP24386 653 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 FRKP42685 505 aaPredicted RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 NUMBP49757 651 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 DUSP4Q13115 394 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 UBAP2Q5T6F2 1119 aaKnown RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 GARNL3Q5VVW2 1013 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SYT14Q8NB59 555 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 FANK1Q8TC84 345 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MUS81Q96NY9 551 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SORT1Q99523 831 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CSNK1G1Q9HCP0 422 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 NPFFR2Q9Y5X5 522 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 A0A0A6YYH2 397 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 A6NJ64 397 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CHURC1-FNTBB4DL54 471 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SC5DO75845 299 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ZBTB7AO95365 584 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ALPLP05186 524 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 NCS1P62166 190 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TBRG1Q3YBR2 411 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CCDC71LQ8N9Z2 235 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MS4A4EQ96PG1 132 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 YIPF4Q9BSR8 244 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 NPLQ9BXD5 320 aaPredicted RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ATE1O95260 518 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 UCHL1P09936 223 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 HMBOX1Q6NT76 420 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 DPY19L3Q6ZPD9 716 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 PXKQ7Z7A4 578 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 OR2T4Q8NH00 348 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 OLIG1Q8TAK6 271 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 RIPOR3Q96MK2 946 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 WDR26Q9H7D7 661 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MTHFD2LQ9H903 347 aaPredicted RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 INTS6Q9UL03 887 aaKnown RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM150BA6NC51 233 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 LRATO95237 230 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 EXOC3L2Q2M3D2 409 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 TREML1Q86YW5 311 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF321PQ8N8H1 164 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 WDSUB1Q8N9V3 476 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 NT5C3BQ969T7 300 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF668Q96K58 619 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 KIF25Q9UIL4 384 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MSRAQ9UJ68 235 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CPNE6O95741 557 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CDK4P11802 303 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 AIMP2Q13155 320 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 SLBPQ14493 270 aaKnown RBP eCLIP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 LINGO2Q7L985 606 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 OR4K14Q8NGD5 310 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MCMBPQ9BTE3 642 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 PCDHAC1Q9H158 963 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 U3KQV3 271 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 VSTM5A8MXK1 200 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MAFKO60675 156 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 BCKDHAP12694 445 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 S100PP25815 95 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 MAZP56270 477 aaKnown RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF155Q12901 538 aaPredicted RBP8.44□□□□□ -1.06
COL6A5-202ENST00000312481 CDK5R2Q13319 367 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 UBE2NLQ5JXB2 153 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 GAB3Q8WWW8 586 aa8.44□□□□□ -1.06
COL6A5-202ENST00000312481 SYT3Q9BQG1 590 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms