RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SPRED3Q2MJR0 410 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 ZNF678Q5SXM1 525 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 C10orf62Q5T681 223 aaPredicted RBP18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 MILR1Q7Z6M3 343 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 METTL4Q8N3J2 472 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 POGLUT1Q8NBL1 392 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 MYRIPQ8NFW9 859 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 NUBPLQ8TB37 319 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 DOK4Q8TEW6 326 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 ATP6V1E2Q96A05 226 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 TMEM125Q96AQ2 219 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 FBXL20Q96IG2 436 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 PLSCR2Q9NRY7 297 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 TINAGQ9UJW2 476 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 EMCNQ9ULC0 261 aa18.36■□□□□ 0.53
PDZRN3-202ENST00000308537 EXPH5Q8NEV8 1989 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 FOXO6A8MYZ6 492 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 PDYNP01213 254 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 ALOX15P16050 662 aaPredicted RBP18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 TNNI3P19429 210 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 PTGER1P34995 402 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 SOX18P35713 384 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 BUD31P41223 144 aaPredicted RBP18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 HERVK_113P63132 956 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 CLCQ05315 142 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 BIKQ13323 160 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 MPEG1Q2M385 716 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 CMPK2Q5EBM0 449 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 TCHHL1Q5QJ38 904 aaPredicted RBP18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 LCA5Q86VQ0 697 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 SPPL2CQ8IUH8 684 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 GPALPP1Q8IXQ4 340 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 EIF1ADQ8N9N8 165 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 FAM98AQ8NCA5 519 aaKnown RBP18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 DGAT2Q96PD7 388 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 ERVK-6Q9BXR3 956 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 SH2D2AQ9NP31 389 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 PSMC3IPQ9P2W1 217 aaPredicted RBP18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 TRPS1Q9UHF7 1281 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 ADAM29Q9UKF5 820 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 NCKAP5O14513 1909 aa18.35■□□□□ 0.53
PDZRN3-202ENST00000308537 NINQ8N4C6 2090 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 A8MVJ9 347 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 GOLGA8RI6L899 631 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 ADAM10O14672 748 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 OR4F21O95013 312 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 OTCP00480 354 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 SHBGP04278 402 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 GALNSP34059 522 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 PLIN5Q00G26 463 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 ZNF750Q32MQ0 723 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 PIGGQ5H8A4 983 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 LGSNQ5TDP6 509 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 IL20RBQ6UXL0 311 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 C7orf57Q8NEG2 295 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 ACMSDQ8TDX5 336 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 TRPC4APQ8TEL6 797 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 ASB15Q8WXK1 588 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 HPF1Q9NWY4 346 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 CES1P1Q9UKY3 287 aa18.34■□□□□ 0.53
PDZRN3-202ENST00000308537 A0A1W2PPM1 405 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 KLRC4-KLRK1H3BQV0 150 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 CCL21O00585 134 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 HS6ST1O60243 411 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 KLK1P06870 262 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 CT62P0C5K7 136 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 PYGBP11216 843 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 TLX1P31314 330 aaPredicted RBP18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 SLC37A1P57057 533 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 ERVK-8P63133 956 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 FOXO1Q12778 655 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 CDSNQ15517 529 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 CYP20A1Q6UW02 462 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 COMMD6Q7Z4G1 85 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 MMP21Q8N119 569 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 GHDCQ8N2G8 530 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF441Q8N8Z8 693 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 RBM18Q96H35 190 aaKnown RBP18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF382Q96SR6 550 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 HBEGFQ99075 208 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 BRF2Q9HAW0 419 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 TIMMDC1Q9NPL8 285 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 SH3BGRL2Q9UJC5 107 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 ERVK-19Q9WJR5 959 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 HRH3Q9Y5N1 445 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 LRBAP50851 2863 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 ADGRG4Q8IZF6 3080 aa18.33■□□□□ 0.52
PDZRN3-202ENST00000308537 FBN2P35556 2912 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 IQANK1A0A1B0GTG1 560 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 GLSO94925 669 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 SLC35E2P0CK97 266 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 COX7A2P14406 83 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 IMPDH1P20839 514 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 ATP5F1P24539 256 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 TNFRSF8P28908 595 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 ARL1P40616 181 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 PRKAA2P54646 552 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 RBPJQ06330 500 aa18.32■□□□□ 0.52
PDZRN3-202ENST00000308537 ASPHQ12797 758 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms