RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CRISP1P54107 249 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 SCGB2B2Q4G0G5 96 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 PIGGQ5H8A4 983 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 CDKL4Q5MAI5 379 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 ZNF517Q6ZMY9 492 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 PLEKHG7Q6ZR37 379 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 SLC22A16Q86VW1 577 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 GATSQ8NAP1 163 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 OR6N2Q8NGY6 317 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 MR1Q95460 341 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 HS6ST2Q96MM7 605 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 NPIPB15A6NHN6 443 aaPredicted RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 E7EQ34 232 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 DLGAP1O14490 977 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 SLC16A8O95907 504 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 TAS2R38P59533 333 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 RPS26P62854 115 aaKnown RBP15.24■□□□□ 0.03
USP42-201ENST00000306177 RAB39AQ14964 217 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 RNF111Q6ZNA4 994 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 OR8K5Q8NH50 307 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 C16orf78Q8WTQ4 265 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 MMP27Q9H306 513 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 TRPV4Q9HBA0 871 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
USP42-201ENST00000306177 FGF4P08620 206 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ITGA5P08648 1049 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 SLC9A3P48764 834 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 PLCXD2Q0VAA5 305 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 NPRL3Q12980 569 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 AAK1Q2M2I8 961 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 PTERQ96BW5 349 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 HSPA12BQ96MM6 686 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 PELI2Q9HAT8 420 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ZFR2Q9UPR6 939 aaKnown RBP15.23■□□□□ 0.03
USP42-201ENST00000306177 PIAS3Q9Y6X2 628 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ITGB4P16144 1822 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 JMJD7P0C870 316 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 IL4RP24394 825 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ACTC1P68032 377 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ACTA1P68133 377 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 RHBDF1Q96CC6 855 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 FBXO9Q9UK97 447 aaPredicted RBP15.23■□□□□ 0.03
USP42-201ENST00000306177 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 UGDHO60701 494 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 CA3P07451 260 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 MRPL3P09001 348 aaKnown RBP15.23■□□□□ 0.03
USP42-201ENST00000306177 PDHA2P29803 388 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 DEFB103AP81534 67 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ULK3Q6PHR2 472 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 XKR5Q6UX68 686 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 OR52N2Q8NGI0 321 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 OR4C15Q8NGM1 316 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 KLF16Q9BXK1 252 aaPredicted RBP15.23■□□□□ 0.03
USP42-201ENST00000306177 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ZNF69Q9UC07 566 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 CNOT11Q9UKZ1 510 aaKnown RBP15.23■□□□□ 0.03
USP42-201ENST00000306177 PLCL2Q9UPR0 1127 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ZNF451Q9Y4E5 1061 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 EPCAMP16422 314 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ETV4P43268 484 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 TRAM1Q15629 374 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 COMMD6Q7Z4G1 85 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 KLHDC8AQ8IYD2 350 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ADAMTS18Q8TE60 1221 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 R3HDMLQ9H3Y0 253 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 FANCFQ9NPI8 374 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 ASB6Q9NWX5 421 aa15.23■□□□□ 0.03
USP42-201ENST00000306177 HYKKA2RU49 373 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 ANHXE9PGG2 379 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 ATF6P18850 670 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 WDR5P61964 334 aaKnown RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 HNRNPA0Q13151 305 aaKnown RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 MAD2L1BPQ15013 274 aaPredicted RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 RAB41Q5JT25 222 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 OGFRL1Q5TC84 451 aaPredicted RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 ZNF615Q8N8J6 731 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 STRADBQ9C0K7 418 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 LINC00597Q9H2U6 94 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 GSTO2Q9H4Y5 243 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 LDAHQ9H6V9 325 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 OR2B3O76000 313 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 PRH1P02810 166 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 CELP19835 753 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 CLCN2P51788 898 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 THOC7Q6I9Y2 204 aaKnown RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 ENPP6Q6UWR7 440 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 NKX2-4Q9H2Z4 354 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 TMEM45AQ9NWC5 275 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 MTMR10Q9NXD2 777 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 SCML1Q9UN30 329 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 SLC35F4A4IF30 521 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 LAMP1P11279 417 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 GCGRP47871 477 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 MAZP56270 477 aaKnown RBP15.22■□□□□ 0.03
USP42-201ENST00000306177 CLRN1P58418 232 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 OR51A7Q8NH64 312 aa15.22■□□□□ 0.03
USP42-201ENST00000306177 PMM1Q92871 262 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms