RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CCBE1Q6UXH8 406 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 GDPD3Q7L5L3 318 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 C6orf120Q7Z4R8 191 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 MRPL43Q8N983 215 aaKnown RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 ZNF557Q8N988 423 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 OR5D16Q8NGK9 328 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 APOBEC4Q8WW27 367 aaKnown RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 TFGQ92734 400 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 RSPRY1Q96DX4 576 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 CCDC32Q9BV29 185 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 CNPPD1Q9BV87 410 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 OR52A5Q9H2C5 316 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 TEX10Q9NXF1 929 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 SPATA7Q9P0W8 599 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 TLR4O00206 839 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 MFN2O95140 757 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 CHRM5P08912 532 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 DDCP20711 480 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 C9orf64Q5T6V5 341 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 KHDRBS2Q5VWX1 349 aaKnown RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 PAQR6Q6TCH4 344 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 COMTD1Q86VU5 262 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 MEX3DQ86XN8 651 aaKnown RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 SLC34A3Q8N130 599 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 IQCF1Q8N6M8 205 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 OR2L2Q8NH16 312 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 RAD51AP1Q96B01 352 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 MTERF3Q96E29 417 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 TAPBPLQ9BX59 468 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 ERVK13-1Q9NX77 482 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 REV1Q9UBZ9 1251 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 TMCC3Q9ULS5 477 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 ANHXE9PGG2 379 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 CCRL2O00421 344 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 PRNPP04156 253 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 ADRB3P13945 408 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 TNNI3P19429 210 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 TGM4P49221 684 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 NKX2-5P52952 324 aaPredicted RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 PIN1Q13526 163 aaPredicted RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 SYPL1Q16563 259 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 UNC5DQ6UXZ4 953 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 C17orf64Q86WR6 236 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 MMAAQ8IVH4 418 aaKnown RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 FAM20CQ8IXL6 584 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 KRT78Q8N1N4 520 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 FAM46DQ8NEK8 389 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 SDHCQ99643 169 aaPredicted RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 MACROD1Q9BQ69 325 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 LGR4Q9BXB1 951 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 UCK2Q9BZX2 261 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 NUAK2Q9H093 628 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 RERGLQ9H628 205 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 EHD3Q9NZN3 535 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 NPAP1Q9NZP6 1156 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 MARK1Q9P0L2 795 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 A0A075B6Q4 140 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 PSMD11O00231 422 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 HMGN4O00479 90 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 PDPK1O15530 556 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 TMPRSS11DO60235 418 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 PRKRAO75569 313 aaKnown RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 CYP7B1O75881 506 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 ALPPL2P10696 532 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 DDX6P26196 483 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 ELAVL4P26378 380 aaKnown RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 BSGP35613 385 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 SLC15A1P46059 708 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 ARHGEF6Q15052 776 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 NDUFA5Q16718 116 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 SAXO2Q658L1 398 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 GPR65Q8IYL9 337 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 NEURL3Q96EH8 262 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
CSDC2-201ENST00000306149 MVB12BQ9H7P6 319 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 SIAEQ9HAT2 523 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 KCNK12Q9HB15 430 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 KCND3Q9UK17 655 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 TRAPPC4Q9Y296 219 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
CSDC2-201ENST00000306149 REV3LO60673 3130 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 PRAMEF27A3QJZ7 478 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 GLOD5A6NK44 160 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 APOA1P02647 267 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 LRRC26Q2I0M4 334 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 DCST1Q5T197 706 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SLC30A8Q8IWU4 369 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 TCEANCQ8N8B7 351 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 IL17RDQ8NFM7 739 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 XAGE5Q8WWM1 108 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 UBE2E3Q969T4 207 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 OPALINQ96PE5 141 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 YIPF4Q9BSR8 244 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SERHL2Q9H4I8 314 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 LHX9Q9NQ69 397 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms