RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 A0A0G2JPF8 293 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ZCWPW2A0A1B0GU75 182 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 HNRNPCL3B7ZW38 293 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 HNRNPCL4P0DMR1 293 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 SNTA1Q13424 505 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GAS6Q14393 721 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 PLEKHG7Q6ZR37 379 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 RAB7BQ96AH8 199 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF689Q96CS4 500 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 LIPT1Q9Y234 373 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 SLC1A7O00341 560 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF623O75123 536 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF81P51508 661 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 COQ5Q5HYK3 327 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 TMEM164Q5U3C3 297 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 SLC25A25Q6KCM7 469 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CPNE2Q96FN4 548 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 NUMA1Q14980 2115 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 C1orf226A1L170 272 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 HSD17B1P14061 328 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CLDN10P78369 228 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 NXPE4Q6UWF7 544 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CLECL1Q8IZS7 167 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 APCDD1Q8J025 514 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 Q8N402 240 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 OR52P1PQ8NH57 321 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 IL21RQ9HBE5 538 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 PRODH2Q9UF12 536 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 HCRTR2O43614 444 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 VEGFDO43915 354 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 GABARAPL2P60520 117 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 PMS2P3Q13401 168 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ATXN7L3Q14CW9 347 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 TRAM1Q15629 374 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 C1orf189Q5VU69 101 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 GPAT4Q86UL3 456 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 OR5J2Q8NH18 312 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF350Q9GZX5 532 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 SLCO3A1Q9UIG8 710 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CNOT11Q9UKZ1 510 aaKnown RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 M0R036 132 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 BPIP17213 487 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 SPHARQ15513 63 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 DTX3Q8N9I9 347 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 MYRFLQ96LU7 910 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 PTGES2Q9H7Z7 377 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 C19orf25Q9UFG5 118 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 DKKL1Q9UK85 242 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 PRLP01236 227 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 S1PR1P21453 382 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CCNOP22674 350 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 LRIT3Q3SXY7 679 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 GLT8D1Q68CQ7 371 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 SORCS1Q8WY21 1168 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 LRR1Q96L50 414 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 HYKKA2RU49 373 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 OR6C74A6NCV1 312 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ARRB1P49407 418 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CLRN1P58418 232 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 NNATQ16517 81 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CATSPEREQ5SY80 951 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 RPL13AP3Q6NVV1 102 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 LRRC25Q8N386 305 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CD8B2A6NJW9 211 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 M0R233 179 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 NME4O00746 187 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 KLF8O95600 359 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CD8BP10966 210 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ETFAP13804 333 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ACTC1P68032 377 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 ACTA1P68133 377 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 HS3ST5Q8IZT8 346 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 DPH7Q9BTV6 452 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 GTPBP2Q9BX10 602 aaKnown RBP13.34□□□□□ -0.27
PRKCB-201ENST00000303531 STRA6Q9BX79 667 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 CARD8Q9Y2G2 431 aa13.34□□□□□ -0.27
PRKCB-201ENST00000303531 PLD2O14939 933 aa13.33□□□□□ -0.27
PRKCB-201ENST00000303531 NUAK1O60285 661 aa13.33□□□□□ -0.27
PRKCB-201ENST00000303531 PFKMP08237 780 aa13.33□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF806P0C7X5 589 aa13.33□□□□□ -0.27
PRKCB-201ENST00000303531 RPL19P84098 196 aaKnown RBP13.33□□□□□ -0.27
PRKCB-201ENST00000303531 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.27
PRKCB-201ENST00000303531 ANHXE9PGG2 379 aa13.33□□□□□ -0.28
PRKCB-201ENST00000303531 HRH2P25021 359 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms