RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NR2F1P10589 423 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TNFRSF17Q02223 184 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 RELAQ04206 551 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 MYBPC3Q14896 1274 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 NHSL2Q5HYW2 709 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 OR52E8Q6IFG1 317 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TMEM107Q6UX40 140 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 CNRIP1Q96F85 164 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 SIRT3Q9NTG7 399 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 KIF17Q9P2E2 1029 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 FAM32AQ9Y421 112 aaKnown RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 K7ESF4 209 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 PDE9AO76083 593 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 THRBP10828 461 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 GNSP15586 552 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 MATN1P21941 496 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 KHKP50053 298 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 SIM1P81133 766 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 MANEAQ5SRI9 462 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 UGT2A3Q6UWM9 527 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 RNF44Q7L0R7 432 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 OR4K14Q8NGD5 310 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 OR56A1Q8NGH5 318 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 NCSTNQ92542 709 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 YIPF4Q9BSR8 244 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 ANKHQ9HCJ1 492 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 UBAP1Q9NZ09 502 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 IFT80Q9P2H3 777 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 P2RX2Q9UBL9 471 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 SNAP29O95721 258 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 CAPZBP47756 277 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 VLDLRP98155 873 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 DMWDQ09019 674 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 SMYD1Q8NB12 490 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF555Q8NEP9 628 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TFAP2CQ92754 450 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 MOAP1Q96BY2 351 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TGM7Q96PF1 710 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 IER2Q9BTL4 223 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 DUSP15Q9H1R2 295 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 OR51I1Q9H343 314 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 EQTNQ9NQ60 294 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 SH3GLB1Q9Y371 365 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 CABIN1Q9Y6J0 2220 aa13.7□□□□□ -0.22
SHCBP1-201ENST00000303383 PRSS23O95084 383 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 OR12D1P0DN82 309 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 CAPGP40121 348 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 FNTBP49356 437 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 XKP51811 444 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 LIM2P55344 173 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 SKP1P63208 163 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 GK3PQ14409 553 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 TMEM19Q96HH6 336 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF607Q96SK3 696 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 EPS8L2Q9H6S3 715 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 SMURF2Q9HAU4 748 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 NAALAD2Q9Y3Q0 740 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 LILRA5A6NI73 299 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 UPK1AO00322 258 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 PIAS2O75928 621 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 FHP07954 510 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 NELFEP18615 380 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 PRKACGP22612 351 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 DCTP40126 519 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 MLLT3P42568 568 aaPredicted RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ARRB1P49407 418 aaPredicted RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ARL4DP49703 201 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 RAD23AP54725 363 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 TXNL4AP83876 142 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 AP1ARQ63HQ0 302 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 MCATQ8IVS2 390 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 CHERPQ8IWX8 916 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 HS3ST5Q8IZT8 346 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 LRRC25Q8N386 305 aaPredicted RBP13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 OR9A2Q8NGT5 310 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 DNASE2BQ8WZ79 361 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 PNPLA3Q9NST1 481 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 UCKL1Q9NWZ5 548 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 KLK4Q9Y5K2 254 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 ITGA2P17301 1181 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 MAGEA2P43356 314 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 CLCN2P51788 898 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 EPS8Q12929 822 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 RUNX2Q13950 521 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 LYSMD4Q5XG99 296 aa13.69□□□□□ -0.22
SHCBP1-201ENST00000303383 TTC33Q6PID6 262 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms