RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SMPD3Q9NY59 655 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 KCMF1Q9P0J7 381 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 DLGAP2Q9P1A6 1054 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 PDP2Q9P2J9 529 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 FBXW2Q9UKT8 454 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 PADI4Q9UM07 663 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 MAP4K5Q9Y4K4 846 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 SNX8Q9Y5X2 465 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 SLC22A7Q9Y694 548 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 CHD8Q9HCK8 2581 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 ARHGEF17Q96PE2 2063 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 MDC1Q14676 2089 aaKnown RBP11.33□□□□□ -0.6
TPM3-202ENST00000302206 LOC105369274A0A096LPK9 316 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 LOC102723532A0A0G2JNH3 316 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 G3V2T6 193 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 H0YAE9 185 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 GNGT2O14610 69 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 PGRMC2O15173 223 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 BCAT2O15382 392 aaPredicted RBP11.33□□□□□ -0.6
TPM3-202ENST00000302206 FABP3P05413 133 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 PROS1P07225 676 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 ADRB1P08588 477 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 IFI6P09912 130 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 TLX1P31314 330 aaPredicted RBP11.33□□□□□ -0.6
TPM3-202ENST00000302206 MPIP34949 423 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 CAPZBP47756 277 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 NCBP2P52298 156 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM3-202ENST00000302206 CRYBA2P53672 197 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 ARSFP54793 590 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 MAZP56270 477 aaKnown RBP11.33□□□□□ -0.6
TPM3-202ENST00000302206 MERTKQ12866 999 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 EPS8Q12929 822 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 HSPB3Q12988 150 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 C14orf28Q4W4Y0 310 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 OR2T5Q6IEZ7 315 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 OR52E8Q6IFG1 317 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 FRMPD2BQ6IN97 320 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 NIPAL1Q6NVV3 410 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 CEACAM20Q6UY09 585 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 OR4N4Q8N0Y3 316 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 C19orf47Q8N9M1 422 aaKnown RBP11.33□□□□□ -0.6
TPM3-202ENST00000302206 OR56A1Q8NGH5 318 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 OR2T29Q8NH02 315 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 OR5AK3PQ8NH89 298 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 NFKBIDQ8NI38 313 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 MIPOL1Q8TD10 442 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 LZICQ8WZA0 190 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 UCN3Q969E3 161 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 MAL2Q969L2 176 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 CNRIP1Q96F85 164 aaPredicted RBP11.33□□□□□ -0.6
TPM3-202ENST00000302206 C10orf90Q96M02 699 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 ZNF681Q96N22 645 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 FCRL4Q96PJ5 515 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 TRAPPC9Q96Q05 1148 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 GABARAPL1Q9H0R8 117 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 C5AR2Q9P296 337 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 EPHA6Q9UF33 1036 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 BAG5Q9UL15 447 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 PADI2Q9Y2J8 665 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 ZNF780BQ9Y6R6 833 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
TPM3-202ENST00000302206 ATRXP46100 2492 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 GPR179Q6PRD1 2367 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 A6NHS1 94 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 EMC8O43402 210 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SRPX2O60687 465 aaPredicted RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 B4GALT2O60909 372 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 PIAS2O75928 621 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 PDE9AO76083 593 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 ALPLP05186 524 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 PVRP15151 417 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CDH3P22223 829 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CPN2P22792 545 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 MYF6P23409 242 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 GPC1P35052 558 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 KHKP50053 298 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 LIM2P55344 173 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 ITGA1P56199 1179 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 KCNJ10P78508 379 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SPIDRQ14159 915 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 GK3PQ14409 553 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SLC36A3Q495N2 470 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 IQCCQ4KMZ1 466 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 IFI44LQ53G44 452 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 PRAMEF8Q5VWM4 474 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 PRAMEF7Q5VXH5 474 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 C18orf63Q68DL7 685 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 SHQ1Q6PI26 577 aaKnown RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
TPM3-202ENST00000302206 TMEFF1Q8IYR6 380 aa11.32□□□□□ -0.6
TPM3-202ENST00000302206 CARFQ8N187 725 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms