RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SDCCAG3Q96C92 435 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 MAGED4Q96JG8 741 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 SLC38A3Q99624 504 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 DAPP1Q9UN19 280 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 U3KQV3 271 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 LILRA5A6NI73 299 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 E2F6O75461 281 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 PIAS2O75928 621 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 CTSBP07858 339 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 OLR1P78380 273 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 WDR45BQ5MNZ6 344 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 TMEM64Q6YI46 380 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 MAMSTRQ6ZN01 415 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 SHISA5Q8N114 240 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 SDR16C5Q8N3Y7 309 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 ZNF655Q8N720 491 aaPredicted RBP21.02■□□□□ 0.96
SMAD1-201ENST00000302085 C19orf47Q8N9M1 422 aaKnown RBP21.02■□□□□ 0.96
SMAD1-201ENST00000302085 CYGBQ8WWM9 190 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 CSF3RQ99062 836 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 SOX17Q9H6I2 414 aaPredicted RBP21.02■□□□□ 0.96
SMAD1-201ENST00000302085 CD320Q9NPF0 282 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 SEMA3GQ9NS98 782 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 ZCCHC3Q9NUD5 404 aaKnown RBP21.02■□□□□ 0.96
SMAD1-201ENST00000302085 GIMAP4Q9NUV9 329 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 PSME2Q9UL46 239 aa21.02■□□□□ 0.96
SMAD1-201ENST00000302085 ZNF860A6NHJ4 632 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 HPRP00739 348 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 MPIP34949 423 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 BUD31P41223 144 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 AFF3P51826 1226 aaKnown RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 ADARB1P78563 741 aaKnown RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 PPP2R2BQ00005 443 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 SLC35G5Q96KT7 338 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 BARD1Q99728 777 aaKnown RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 IER2Q9BTL4 223 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 USE1Q9NZ43 259 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 BAG5Q9UL15 447 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 RAB23Q9ULC3 237 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 ZNF780BQ9Y6R6 833 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 PDGFBP01127 241 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 BCHEP06276 602 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 OR12D1P0DN82 309 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 ZNF10P21506 573 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 MYF6P23409 242 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 CAPGP40121 348 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 CAPZBP47756 277 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 SIM1P81133 766 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 BIRC2Q13490 618 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 ZIK1Q3SY52 487 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 RPS26P11Q5JNZ5 115 aaPredicted RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 SHQ1Q6PI26 577 aaKnown RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 CEP68Q76N32 757 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 SZRD1Q7Z422 152 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 HIPK1Q86Z02 1210 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 MCATQ8IVS2 390 aaKnown RBP21.01■□□□□ 0.95
SMAD1-201ENST00000302085 SFXN5Q8TD22 340 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 FBXL20Q96IG2 436 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 MAP3K3Q99759 626 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 OR51I1Q9H343 314 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 LYRM4Q9HD34 91 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 PDP2Q9P2J9 529 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 PADI2Q9Y2J8 665 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 SLC22A7Q9Y694 548 aa21.01■□□□□ 0.95
SMAD1-201ENST00000302085 A0A1B0GVT2 93 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 PRAMEF27A3QJZ7 478 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 PRAMEF25A6NGN4 478 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 IFNA14P01570 189 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 THRBP10828 461 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 NELFEP18615 380 aaKnown RBP21■□□□□ 0.95
SMAD1-201ENST00000302085 TNFRSF1BP20333 461 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 MATN1P21941 496 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 FNTBP49356 437 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 PRKAG1P54619 331 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 DEFB110Q30KQ9 67 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 TMEM107Q6UX40 140 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 PATL1Q86TB9 770 aaKnown RBP21■□□□□ 0.95
SMAD1-201ENST00000302085 DNAJC22Q8N4W6 341 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 OR9A2Q8NGT5 310 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 SPPL2AQ8TCT8 520 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 TMEM19Q96HH6 336 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 CCDC3Q9BQI4 270 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 NAALAD2Q9Y3Q0 740 aa21■□□□□ 0.95
SMAD1-201ENST00000302085 KIF1CO43896 1103 aaKnown RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 GALR3O60755 368 aaPredicted RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 CLIC3O95833 236 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 ITGA1P56199 1179 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 C14orf28Q4W4Y0 310 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 IFI44LQ53G44 452 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 FAM92BQ6ZTR7 304 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 SLC44A2Q8IWA5 706 aaPredicted RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 ELP4Q96EB1 424 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 RBM4BQ9BQ04 359 aaKnown RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 RBM4Q9BWF3 364 aaKnown RBP20.99■□□□□ 0.95
SMAD1-201ENST00000302085 ZNF696Q9H7X3 374 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 CACNA1IQ9P0X4 2223 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 MYOCOSA0A1B0GUC4 107 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 C5orf58C9J3I9 102 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 PGM3O95394 542 aa20.99■□□□□ 0.95
SMAD1-201ENST00000302085 HOXA6P31267 233 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms