RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 NEIL3Q8TAT5 605 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 SNX33Q8WV41 574 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 PAWRQ96IZ0 340 aaKnown RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 CASD1Q96PB1 797 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 KLF16Q9BXK1 252 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 OR51I1Q9H343 314 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 KRCC1Q9NPI7 259 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 P2RX2Q9UBL9 471 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 PCDHGA3Q9Y5H0 932 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 XIRP1Q702N8 1843 aaKnown RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 PSMD9O00233 223 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 DLGAP1O14490 977 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 KHDRBS3O75525 346 aaKnown RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 ADORA3P0DMS8 318 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 TLX1P31314 330 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 DEFB103AP81534 67 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 SLC14A2Q15849 920 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 DUSP7Q16829 419 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 PRSS36Q5K4E3 855 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 BCL7CQ8WUZ0 217 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 MAPKAP1Q9BPZ7 522 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 MAGIXQ9H6Y5 334 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 DHFRP00374 187 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 KELP23276 732 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 GRPRP30550 384 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 PIK3CBP42338 1070 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 CCR8P51685 355 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 ZNF45Q02386 682 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 BTBD16Q32M84 506 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 CCDC157Q569K6 752 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 PLEKHS1Q5SXH7 462 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 ZDHHC20Q5W0Z9 365 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 FRMPD2BQ6IN97 320 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 ZC3H14Q6PJT7 736 aaKnown RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 RASGEF1AQ8N9B8 481 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 ASCC1Q8N9N2 400 aaKnown RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 ATP6V1C2Q8NEY4 427 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 FAM46AQ96IP4 442 aaKnown RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 TNFRSF10DQ9UBN6 386 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 ITGB1BP2Q9UKP3 347 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 ENPP4Q9Y6X5 453 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 SLC9A3R1O14745 358 aaPredicted RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 MPZL2O60487 215 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ADAMTS4O75173 837 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 GUCY1B2O75343 617 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 STX11O75558 287 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ETHE1O95571 254 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PTPN2P17706 415 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PGDP52209 483 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 MICAQ29983 383 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CBLL1Q75N03 491 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CXXC5Q7LFL8 322 aaKnown RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 HDDC3Q8N4P3 179 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CRELD1Q96HD1 420 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 MRPS30Q9NP92 439 aaKnown RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 SIRT5Q9NXA8 310 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 EIF3KQ9UBQ5 218 aaKnown RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 MBD1Q9UIS9 605 aaPredicted RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 ING4Q9UNL4 249 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ERVK-11Q9UQG0 969 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 YARS2Q9Y2Z4 477 aaKnown RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 CMAHPQ9Y471 501 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PTPRZ1P23471 2315 aaPredicted RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 TSPAN4O14817 238 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PRSS23O95084 383 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 SYN1P17600 705 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 GGT2P36268 569 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PNLIPRP1P54315 467 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 XAF1Q6GPH4 301 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 FRRS1Q6ZNA5 592 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CHMP1BQ7LBR1 199 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 SLC30A8Q8IWU4 369 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 MND1Q9BWT6 205 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PLD2O14939 933 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 SCN2BO60939 215 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ADH1CP00326 375 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ALPPP05187 535 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 DRD5P21918 477 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CHMP24386 653 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 ITPKBP27987 946 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 PRR5P85299 388 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 TIAL1Q01085 375 aaKnown RBP eCLIP12.68□□□□□ -0.38
CASC4-201ENST00000299957 MSRB3Q8IXL7 192 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
CASC4-201ENST00000299957 C9orf43Q8TAL5 461 aaPredicted RBP12.68□□□□□ -0.38
CASC4-201ENST00000299957 LINC01599Q8WXQ3 324 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms