RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PIRO00625 290 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EEF1AKMT2Q5JPI9 291 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PLEKHS1Q5SXH7 462 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR2M4Q96R27 311 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FAM221BA6H8Z2 402 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C1GALT1C1LP0DN25 315 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 AKR1C4P17516 323 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ARRB1P49407 418 aaPredicted RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HK3P52790 923 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LPAL2Q16609 132 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NATD1Q8N6N6 113 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SHDQ96IW2 340 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PIP5K1AQ99755 562 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 BOCQ9BWV1 1114 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SPATA6Q9NWH7 488 aaPredicted RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMEM59LQ9UK28 342 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLITRK5O94991 958 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DNAJB13P59910 316 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FAM189BP81408 668 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TECRLQ5HYJ1 363 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SHQ1Q6PI26 577 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TIFABQ6ZNK6 161 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZDHHC1Q8WTX9 485 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GLYATL1Q969I3 302 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 IGSF21Q96ID5 467 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HDHD5Q9BXW7 423 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EBF1Q9UH73 591 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TEX13CA0A0J9YWL9 993 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 A6NLC8 198 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CSF2RAP15509 400 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EPCAMP16422 314 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 S1PR1P21453 382 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PTGER1P34995 402 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MAGEA3P43357 314 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RPS21P63220 83 aaKnown RBP12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LRRN1Q6UXK5 716 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR52P1PQ8NH57 321 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR51B6Q9H340 312 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CDH10Q9Y6N8 788 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 A0A1W2PQU0 124 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ALDOAP04075 364 aaKnown RBP12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 F8A1P23610 371 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SHMT2P34897 504 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 INAVAQ3KP66 663 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR52E2Q8NGJ4 325 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CIDECQ96AQ7 238 aaPredicted RBP12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 STARD5Q9NSY2 213 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MYADML2A6NDP7 307 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ANHXE9PGG2 379 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SDHDO14521 159 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 POU3F4P49335 361 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PON2Q15165 354 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF584Q8IVC4 421 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PRR18Q8N4B5 295 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PGAM5Q96HS1 289 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF778Q96MU6 729 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 hCG_1807616A0A1W2PRN6 198 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF850A8MQ14 1090 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RP2O75695 350 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PEPDP12955 493 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 JUNDP17535 347 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ATP6AP1Q15904 470 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZSWIM9Q86XI8 627 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NELL2Q99435 816 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DPH7Q9BTV6 452 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GPR83Q9NYM4 423 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCMF1Q9P0J7 381 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MKLN1Q9UL63 735 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 B3GALT1Q9Y5Z6 326 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 A0A1B0GVC2 190 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MVKQ03426 396 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ELOCQ15369 112 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR2T33Q8NG76 320 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR52B6Q8NGF0 335 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SCP2D1Q9UJQ7 156 aa12.99□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TRBV2A0A0J9YWF9 115 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CLCA1A8K7I4 914 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OXTRP30559 389 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 VIPR2P41587 438 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR4D2P58180 307 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ATAD3CQ5T2N8 411 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LIPJQ5W064 366 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LINC00471Q8N535 108 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 WDTC1Q8N5D0 677 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCNJ9Q92806 393 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DOHHQ9BU89 302 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 M0R129 80 aa12.98□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DLGAP1O14490 977 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms