RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ZNF513Q8N8E2 541 aaPredicted RBP12.92□□□□□ -0.34
CDH8-201ENST00000299345 CAMK1GQ96NX5 476 aa12.92□□□□□ -0.34
CDH8-201ENST00000299345 MMP27Q9H306 513 aa12.92□□□□□ -0.34
CDH8-201ENST00000299345 DSN1Q9H410 356 aa12.92□□□□□ -0.34
CDH8-201ENST00000299345 SFXN1Q9H9B4 322 aa12.92□□□□□ -0.34
CDH8-201ENST00000299345 A4GALTQ9NPC4 353 aa12.92□□□□□ -0.34
CDH8-201ENST00000299345 WASH6PQ9NQA3 447 aa12.92□□□□□ -0.34
CDH8-201ENST00000299345 PRAMEF25A6NGN4 478 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 ZW10O43264 779 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 KDM1AO60341 852 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 SULT1C4O75897 302 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 CRISP3P54108 245 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 SEC13P55735 322 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 PRDX1Q06830 199 aaKnown RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 KLHL17Q6TDP4 642 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 C11orf74Q86VG3 221 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TRIM69Q86WT6 500 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TMEM145Q8NBT3 493 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 OR5D16Q8NGK9 328 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 MACROD1Q9BQ69 325 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 KCNK12Q9HB15 430 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 CHCHD3Q9NX63 227 aaKnown RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 MED26O95402 600 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 PTHP01270 115 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 ADORA3P0DMS8 318 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 FEN1P39748 380 aaKnown RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 LASP1Q14847 261 aaKnown RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 SYPL1Q16563 259 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 RD3Q7Z3Z2 195 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 HMGN2P46Q86SG4 172 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 RAB11FIP5Q9BXF6 653 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 C1QTNF7Q9BXJ2 289 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 NUAK2Q9H093 628 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 AKIP1Q9NQ31 210 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 DNAJC27Q9NZQ0 273 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3DA0A087WVF3 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3IA0A087WXS9 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3KA0A087X1G2 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 SH3D21A4FU49 640 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3FA6NER0 549 aaPredicted RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 OR52A4PA6NMU1 304 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3LB9A6J9 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3HP0C7X1 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 OSMP13725 252 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 DRD2P14416 443 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 CBLP22681 906 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 PTGER1P34995 402 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 CSNK1G2P78368 415 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 DNASE1L3Q13609 305 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 GNA13Q14344 377 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 IRF4Q15306 451 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TSTQ16762 297 aaKnown RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3GQ6DHY5 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3CQ6IPX1 549 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 SDE2Q6IQ49 451 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TBC1D3Q8IZP1 549 aaPredicted RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 MGLLQ99685 303 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 TREX2Q9BQ50 279 aaPredicted RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 PITHD1Q9GZP4 211 aaPredicted RBP12.91□□□□□ -0.34
CDH8-201ENST00000299345 OR51E2Q9H255 320 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 GDE1Q9NZC3 331 aa12.91□□□□□ -0.34
CDH8-201ENST00000299345 A8MVJ9 347 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 FAAHO00519 579 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 SLC31A1O15431 190 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 LCMT2O60294 686 aaKnown RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 CLEC3AO75596 197 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 MFN2O95140 757 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 ALOX5P09917 674 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 TIE1P35590 1138 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 KHKP50053 298 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 HMGA2P52926 109 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDH8-201ENST00000299345 SLAMF1Q13291 335 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 LRRC32Q14392 662 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 SLC46A3Q7Z3Q1 461 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 OR8K5Q8NH50 307 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 ZNF354BQ96LW1 612 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 EQTNQ9NQ60 294 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 ACSS1Q9NUB1 689 aaPredicted RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 TAS2R16Q9NYV7 291 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 TVP23BQ9NYZ1 205 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 NINQ8N4C6 2090 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 CACNB4O00305 520 aaPredicted RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 PPM1DO15297 605 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 KLHL18O94889 574 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 GDI1P31150 447 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 GSTM5P46439 218 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 RAB8AP61006 207 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 RELAQ04206 551 aa12.9□□□□□ -0.34
CDH8-201ENST00000299345 PIN1Q13526 163 aaPredicted RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
CDH8-201ENST00000299345 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms