RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 KDELR2P33947 212 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ARRB1P49407 418 aaPredicted RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 CDK9P50750 372 aaKnown RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 CCT8P50990 548 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 CLCN2P51788 898 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 VSX2P58304 361 aaPredicted RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 TNFRSF17Q02223 184 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 HSPB3Q12988 150 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 RUNX2Q13950 521 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ZC3H12BQ5HYM0 836 aaKnown RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 GCNT6Q5T4J0 391 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ANGPTL8Q6UXH0 198 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 C11orf65Q8NCR3 313 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ZFP28Q8NHY6 868 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ASPSCR1Q9BZE9 553 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 TMEM38AQ9H6F2 299 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 FAF1Q9UNN5 650 aaPredicted RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 SAMD4AQ9UPU9 718 aaKnown RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 SLC22A7Q9Y694 548 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 FAM149AA5PLN7 773 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 NUDT21O43809 227 aaKnown RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 CBFA2T3O75081 653 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 SMIM18P0DKX4 95 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 MED21Q13503 144 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ARHGEF39Q8N4T4 335 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 CNRIP1Q96F85 164 aaPredicted RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 SLC47A1Q96FL8 570 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 TCTN2Q96GX1 697 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 C10orf90Q96M02 699 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 BTBD9Q96Q07 612 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 CCDC3Q9BQI4 270 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 RBM38Q9H0Z9 239 aaKnown RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 LYRM4Q9HD34 91 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ZSCAN32Q9NX65 697 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 LRIT1Q9P2V4 623 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 DAPP1Q9UN19 280 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 SNX8Q9Y5X2 465 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 H0YJX3 145 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 B4GALT2O60909 372 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 LDLRP01130 860 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 LIM2P55344 173 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 MCATQ8IVS2 390 aaKnown RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 SLC35F3Q8IY50 421 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 ICA1LQ8NDH6 482 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 SUN3Q8TAQ9 357 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 PYURFQ96I23 114 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 BBS4Q96RK4 519 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 TMEM121BQ9BXQ6 578 aaPredicted RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 CHRNA10Q9GZZ6 450 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 COQ10BQ9H8M1 238 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 MS4A12Q9NXJ0 267 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 RPS6KA6Q9UK32 745 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 MAP4K5Q9Y4K4 846 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 DNAH14Q0VDD8 3507 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 PI4KAP42356 2102 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 PCDH15Q96QU1 1955 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 TLCD2A6NGC4 264 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 CCDC160A6NGH7 325 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 HRO43593 1189 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 ERAL1O75616 437 aaKnown RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 PRSS23O95084 383 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 CPN2P22792 545 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 BUD31P41223 144 aaPredicted RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 RPL5P46777 297 aaKnown RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 GABRA4P48169 554 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 NCBP2P52298 156 aaKnown RBP eCLIP14.67□□□□□ -0.06
LSM6-201ENST00000296581 EEF1A2Q05639 463 aaKnown RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 PRTGQ2VWP7 1150 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 INTS11Q5TA45 600 aaKnown RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 PEAR1Q5VY43 1037 aaPredicted RBP14.67□□□□□ -0.06
LSM6-201ENST00000296581 C16orf87Q6PH81 154 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 TMEM64Q6YI46 380 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 FAM92BQ6ZTR7 304 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 CBLL1Q75N03 491 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 MAL2Q969L2 176 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 ZNF681Q96N22 645 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 CD180Q99467 661 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 CIB1Q99828 191 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 UBAP1Q9NZ09 502 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 ENTPD4Q9Y227 616 aa14.67□□□□□ -0.06
LSM6-201ENST00000296581 SH3PXD2BA1X283 911 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 TXNDC9O14530 226 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 SRPX2O60687 465 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 GALR3O60755 368 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 MT-ND1P03886 318 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 CSNK2A2P19784 350 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 CASP9P55211 416 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 GFERP55789 205 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 DUSP2Q05923 314 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 NR1D2Q14995 579 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 ZNF630Q2M218 657 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 DEFB110Q30KQ9 67 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 KANSL1Q7Z3B3 1105 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 EPHX4Q8IUS5 362 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 CROCCP3Q8IVE0 287 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 SCAIQ8N9R8 606 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 ZNF285Q96NJ3 590 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 GIMAP4Q9NUV9 329 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 PSME2Q9UL46 239 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 M0R296 226 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms