RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 A0A1W2PR48 441 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 M0R082 166 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 MFN2O95140 757 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 KRT75O95678 551 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 SPTBP11277 2137 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 PTNP21246 168 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 CERS1P27544 350 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 C21orf59P57076 290 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 PIN1Q13526 163 aaPredicted RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 KIAA1161Q6NSJ0 714 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TCTN3Q6NUS6 607 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ANKRD54Q6NXT1 300 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ZNF605Q86T29 641 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 SLCO6A1Q86UG4 719 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 NUDT13Q86X67 352 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 P3H2Q8IVL5 708 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 PHF10Q8WUB8 498 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 TSACCQ96A04 125 aaPredicted RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 RGMAQ96B86 450 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ZG16BQ96DA0 208 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 MTERF3Q96E29 417 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 DTNBP1Q96EV8 351 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 SIGLEC11Q96RL6 698 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 IL4I1Q96RQ9 567 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 C11orf16Q9NQ32 467 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TMEM74BQ9NUR3 256 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 AHSPQ9NZD4 102 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TBC1D29Q9UFV1 150 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ANGPT4Q9Y264 503 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ENPP4Q9Y6X5 453 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TICRRQ7Z2Z1 1910 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 A0A0A6YYD5 115 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 SH3PXD2BA1X283 911 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 ANKRD33BA6NCL7 494 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 C5orf58C9J3I9 102 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 FRS3O43559 492 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 SLC28A2O43868 658 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 PFDN1O60925 122 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 LAMP2P13473 410 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 PCSK2P16519 638 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 CD36P16671 472 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 C5AR1P21730 350 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 RAB28P51157 221 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 RBBP4Q09028 425 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 SLAMF1Q13291 335 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 HEPACAMQ14CZ8 416 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 ITPRIPL2Q3MIP1 535 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 SYT6Q5T7P8 510 aaPredicted RBP11.15□□□□□ -0.62
RHO-201ENST00000296271 PPP2R2DQ66LE6 453 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 KCT2Q8NC54 265 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 RHOXF1Q8NHV9 184 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 CNRIP1Q96F85 164 aaPredicted RBP11.15□□□□□ -0.62
RHO-201ENST00000296271 AMDHD1Q96NU7 426 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 BTBD2Q9BX70 525 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 C1QTNF2Q9BXJ5 285 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 ZBTB20Q9HC78 741 aaPredicted RBP11.15□□□□□ -0.62
RHO-201ENST00000296271 EQTNQ9NQ60 294 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 THSD1Q9NS62 852 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 MAPRE3Q9UPY8 281 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 PCDHGB1Q9Y5G3 927 aa11.15□□□□□ -0.62
RHO-201ENST00000296271 OR2A25A4D2G3 310 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 DNAJB5O75953 348 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 GABARAPO95166 117 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 EPPINO95925 133 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 EGFP01133 1207 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 PTHP01270 115 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 IFNW1P05000 195 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 GABRB1P18505 474 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 CHMP24386 653 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 CNR2P34972 360 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 GPC1P35052 558 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 RNF144AP50876 292 aaPredicted RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 NCBP2P52298 156 aaKnown RBP eCLIP11.15□□□□□ -0.63
RHO-201ENST00000296271 ADPRHP54922 357 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 DBPQ10586 325 aaPredicted RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 ITGADQ13349 1161 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 ENPP2Q13822 863 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 ARHGAP19Q14CB8 494 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 ZNF829Q3KNS6 432 aaPredicted RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 IGFN1Q86VF2 1251 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 C11orf74Q86VG3 221 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 P2RY8Q86VZ1 359 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 ARMC8Q8IUR7 673 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 DNAJC22Q8N4W6 341 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 MIPOL1Q8TD10 442 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 TREX2Q9BQ50 279 aaPredicted RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 APOOQ9BUR5 198 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 MTIF3Q9H2K0 278 aaKnown RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 MRPS30Q9NP92 439 aaKnown RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 PHPT1Q9NRX4 125 aaPredicted RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 MS4A12Q9NXJ0 267 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 SPATA7Q9P0W8 599 aa11.15□□□□□ -0.63
RHO-201ENST00000296271 APOBEC3BQ9UH17 382 aaKnown RBP11.15□□□□□ -0.63
RHO-201ENST00000296271 PSORS1C1Q9UIG5 152 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms