RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HLCSP50747 726 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ELOCQ15369 112 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ZNF542PQ5EBM4 170 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 CWF19L1Q69YN2 538 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 ANKRD34AQ69YU3 496 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 KDM4DQ6B0I6 523 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 TNFAIP8L2Q6P589 184 aaPredicted RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 ARMC8Q8IUR7 673 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 SFTPA2Q8IWL1 248 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ADAMTS16Q8TE57 1224 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 GEMIN6Q8WXD5 167 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 ADNPQ9H2P0 1102 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 A4GALTQ9NPC4 353 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 BLOC1S6Q9UL45 172 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 RAB23Q9ULC3 237 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ENTPD4Q9Y227 616 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 OR5K3A6NET4 321 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 BCKDKO14874 412 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 JRKO75564 520 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 ERAL1O75616 437 aaKnown RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 FESP07332 822 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 SLC35G6P0C7Q6 338 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 ELK4P28324 431 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 RRM2P31350 389 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 LSSP48449 732 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 CDK9P50750 372 aaKnown RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 DAPP51397 102 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 NCBP2P52298 156 aaKnown RBP eCLIP8.65□□□□□ -1.03
PDPN-201ENST00000294489 PCBP3P57721 371 aaKnown RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 RAB8AP61006 207 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 ZXDAP98168 799 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 TP53BP2Q13625 1128 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 LAPTM4AQ15012 233 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 CEBPEQ15744 281 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 IQCCQ4KMZ1 466 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 MANEAQ5SRI9 462 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 BHLHB9Q6PI77 547 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 SZRD1Q7Z422 152 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 GALNT5Q7Z7M9 940 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 ASPGQ86U10 573 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 CYP4Z1Q86W10 505 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 HORMAD2Q8N7B1 307 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 SETD9Q8NE22 299 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 OR10G6Q8NH81 332 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 BAHD1Q8TBE0 780 aaPredicted RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 HDAC2Q92769 488 aaKnown RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 GAL3ST3Q96A11 431 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 RBM38Q9H0Z9 239 aaKnown RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 ERVMER34-1Q9H9K5 563 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 KRT84Q9NSB2 600 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 SIRT3Q9NTG7 399 aaPredicted RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 GIMAP4Q9NUV9 329 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 NDUFAF4Q9P032 175 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 FBXW2Q9UKT8 454 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 FAM32AQ9Y421 112 aaKnown RBP8.65□□□□□ -1.03
PDPN-201ENST00000294489 PCDHGA8Q9Y5G5 932 aa8.65□□□□□ -1.03
PDPN-201ENST00000294489 A0A0J9YY10 115 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 GSAPA4D1B5 854 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 LILRA5A6NI73 299 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 TMEM229AB2RXF0 380 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 AHCYL1O43865 530 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 CTSVO60911 334 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 PDE9AO76083 593 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 ANXA11P50995 505 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 RPS26P62854 115 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 DMWDQ09019 674 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 TOP3AQ13472 1001 aaPredicted RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 ZNF691Q5VV52 312 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 FIGLAQ6QHK4 219 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 GPR141Q7Z602 305 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 GKN2Q86XP6 184 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 NMD3Q96D46 503 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 AMDHD1Q96NU7 426 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 BARD1Q99728 777 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 ROGDIQ9GZN7 287 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 GLIPR2Q9H4G4 154 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 RIBC2Q9H4K1 309 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 ENAMQ9NRM1 1142 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 THSD1Q9NS62 852 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 LYARQ9NX58 379 aaKnown RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 CES1P1Q9UKY3 287 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 POMT2Q9UKY4 750 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 PSME2Q9UL46 239 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 ZNF451Q9Y4E5 1061 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 ATG4BQ9Y4P1 393 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 A0A1W2PR48 441 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 URADA6NGE7 173 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 GLOD5A6NK44 160 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 TNFRSF11BO00300 401 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 BCHEP06276 602 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 POLR2CP19387 275 aaPredicted RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 CERS1P27544 350 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 RYKP34925 604 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 OR1E2P47887 323 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 WDR5BQ86VZ2 330 aa8.64□□□□□ -1.03
PDPN-201ENST00000294489 SLC44A2Q8IWA5 706 aaPredicted RBP8.64□□□□□ -1.03
PDPN-201ENST00000294489 ARHGEF39Q8N4T4 335 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms