RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 KIR3DP1A8MWS1 328 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 TFECO14948 347 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 NME2P1O60361 137 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 DLX3O60479 287 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 UGDHO60701 494 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ZFAND5O76080 213 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 OR6B1O95007 311 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SCELO95171 688 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 LRATO95237 230 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 CLDN1O95832 211 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 DDAH2O95865 285 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 OTCP00480 354 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 PDYNP01213 254 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 KLK1P06870 262 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 FAM58BPP0C7Q3 252 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 COL6A2P12110 1019 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 COX7A2P14406 83 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ALOX15P16050 662 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 KRT15P19012 456 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 NME2P22392 152 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 PTX3P26022 381 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 HMOX2P30519 316 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 TLX1P31314 330 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 BSGP35613 385 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 HLCSP50747 726 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 GPR143P51810 404 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 HERVK_113P63132 956 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ERVK-8P63133 956 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SERTAD2Q14140 314 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 TERF2Q15554 542 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SCIMPQ6UWF3 145 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 IL20RBQ6UXL0 311 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 HSDL2Q6YN16 418 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 C3P1Q6ZMU1 363 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 NCCRP1Q6ZVX7 275 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 MDGA2Q7Z553 956 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 LGI4Q8N135 537 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 CCNYL1Q8N7R7 359 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 CCDC63Q8NA47 563 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF483Q8TF39 744 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 PTPMT1Q8WUK0 201 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SELENOMQ8WWX9 145 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 DAZLQ92904 295 aaKnown RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 MTBPQ96DY7 904 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SCMH1Q96GD3 660 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ERVK-6Q9BXR3 956 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 TXLNGYQ9BZA5 131 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 C12orf65Q9H3J6 166 aaKnown RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 WDR41Q9HAD4 459 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 LYARQ9NX58 379 aaKnown RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 TINAGQ9UJW2 476 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 ERVK-19Q9WJR5 959 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 V9GYY5 206 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
CCDC58-201ENST00000291458 MYO7BQ6PIF6 2116 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 CCL21O00585 134 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 CHN1P15882 459 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ABOP16442 354 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 STT3AP46977 705 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ALDH9A1P49189 494 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 HTR6P50406 440 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 HK2P52789 917 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 PER3P56645 1201 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 PLGLB1Q02325 96 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 CLCQ05315 142 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 RBPJQ06330 500 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 PCDH1Q08174 1060 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ASPHQ12797 758 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 POU4F2Q12837 409 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF267Q14586 743 aaPredicted RBP9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF750Q32MQ0 723 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 UNC50Q53HI1 259 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 RNFT1Q5M7Z0 435 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 CCNYL2Q5T2Q4 361 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 OR52E8Q6IFG1 317 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 FAM180BQ6P0A1 224 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 GPRIN3Q6ZVF9 776 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 COMMD6Q7Z4G1 85 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF227Q86WZ6 799 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 SULF2Q8IWU5 870 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 C9orf40Q8IXQ3 194 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 C4orf33Q8N1A6 199 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ZCCHC7Q8N3Z6 543 aaKnown RBP9.07□□□□□ -0.96
CCDC58-201ENST00000291458 OR2W6PQ8NHA6 318 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 CDC26Q8NHZ8 85 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ZNF721Q8TF20 911 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ZBTB9Q96C00 473 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 KCNA7Q96RP8 456 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 RASL10BQ96S79 203 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 EBPLQ9BY08 206 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 SHCBP1LQ9BZQ2 653 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 PFDN4Q9NQP4 134 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 VTI1BQ9UEU0 232 aa9.07□□□□□ -0.96
CCDC58-201ENST00000291458 KLF13Q9Y2Y9 288 aaPredicted RBP9.07□□□□□ -0.96
CCDC58-201ENST00000291458 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
CCDC58-201ENST00000291458 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms