RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 IGFBP7Q16270 282 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PRSS53Q2L4Q9 553 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ACER2Q5QJU3 275 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 LIPMQ5VYY2 423 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 LRIG3Q6UXM1 1119 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 COMMD6Q7Z4G1 85 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CRLF3Q8IUI8 442 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SRRM1Q8IYB3 904 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SIRT6Q8N6T7 355 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF321PQ8N8H1 164 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 FAM47BQ8NA70 645 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 MDS2Q8NDY4 140 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 B3GNT7Q8NFL0 401 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 METTL6Q8TCB7 284 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF721Q8TF20 911 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ATP6V1E2Q96A05 226 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 SNRNP40Q96DI7 357 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 APIPQ96GX9 242 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 CNDP1Q96KN2 507 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF681Q96N22 645 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 RPF2Q9H7B2 306 aaKnown RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ADAP2Q9NPF8 381 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 RRAGDQ9NQL2 400 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 TEX10Q9NXF1 929 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PLA2G3Q9NZ20 509 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 STMN3Q9NZ72 180 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PTGFRNQ9P2B2 879 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 VPS29Q9UBQ0 182 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 PCDHGB6Q9Y5F9 930 aa8.54□□□□□ -1.04
HMGN1-201ENST00000288344 GPC6Q9Y625 555 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-201ENST00000288344 ZGRF1Q86YA3 2104 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 EML6Q6ZMW3 1958 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 A6NHS1 94 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 EIF4E1BA6NMX2 242 aaKnown RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 H3BQF6 201 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 J3QKU1 62 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 HRKO00198 91 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 PSMD12O00232 456 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 ULK1O75385 1050 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SPAG7O75391 227 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 NEURL1O76050 574 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 AIFM1O95831 613 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 ALPPP05187 535 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 KLK1P06870 262 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 BPGMP07738 259 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 CPN2P22792 545 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SERPINB3P29508 390 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 CD96P40200 585 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SSR2P43308 183 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 STT3AP46977 705 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 FOLH1Q04609 750 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 DUSP2Q05923 314 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SERTAD2Q14140 314 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 INPP5JQ15735 1006 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 BTBD16Q32M84 506 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 PRR30Q53SZ7 412 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 LINC00696Q6ZRV3 163 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 MYLK4Q86YV6 388 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 OR4N5Q8IXE1 308 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 MMP21Q8N119 569 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 ZADH2Q8N4Q0 377 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 GBP7Q8N8V2 638 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 MORN4Q8NDC4 146 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 OR1N1Q8NGS0 311 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SELENOMQ8WWX9 145 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 C19orf60Q96EN9 201 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SIGLEC12Q96PQ1 595 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 FAM111AQ96PZ2 611 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 TAAR6Q96RI8 345 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 HBEGFQ99075 208 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 TRMOQ9BU70 441 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 MECRQ9BV79 373 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 C20orf27Q9GZN8 174 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 ELOVL6Q9H5J4 265 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 MID1IP1Q9NPA3 183 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 LYARQ9NX58 379 aaKnown RBP8.53□□□□□ -1.04
HMGN1-201ENST00000288344 HEY2Q9UBP5 337 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF639Q9UID6 485 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 FBXW2Q9UKT8 454 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 SNX6Q9UNH7 406 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 PCDHA9Q9Y5H5 950 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 DNAJC15Q9Y5T4 150 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 ACTL7BQ9Y614 415 aa8.53□□□□□ -1.04
HMGN1-201ENST00000288344 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 PTPN13Q12923 2485 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 MYOCOSA0A1B0GUC4 107 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SYNDIG1LA6NDD5 238 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SLC28A2O43868 658 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 NPHS1O60500 1241 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 MYO1DO94832 1006 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 WISP1O95388 367 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 CBX6O95503 412 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 KRT6AP02538 564 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 KRT6BP04259 564 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 CHRNGP07510 517 aa8.52□□□□□ -1.05
HMGN1-201ENST00000288344 SLC35E2P0CK97 266 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms