RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ITGB7P26010 798 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 GSTM5P46439 218 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 HYAL2Q12891 473 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 HEPACAMQ14CZ8 416 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TMEM215Q68D42 235 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 FAM92BQ6ZTR7 304 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 NANOGNBQ7Z5D8 188 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 VN1R5Q7Z5H4 357 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 C2orf73Q8N5S3 287 aaPredicted RBP12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 OR9Q1Q8NGQ5 310 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 OR9A1PQ8NGU1 263 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TMEM203Q969S6 136 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 NEURL3Q96EH8 262 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TTYH2Q9BSA4 534 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 A4GALTQ9NPC4 353 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 SEMA3GQ9NS98 782 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 TVP23BQ9NYZ1 205 aa12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 NFKBIL1Q9UBC1 381 aaPredicted RBP12.58□□□□□ -0.4
SLC28A1-201ENST00000286749 IQCMA0A1B0GVH7 501 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC35F4A4IF30 521 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 INHAP05111 366 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 CXCR2P25025 360 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 SCN1BQ07699 218 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 MLLT11Q13015 90 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 HNRNPA0Q13151 305 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 MADCAM1Q13477 382 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 SAXO2Q658L1 398 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 IKBIPQ70UQ0 350 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 DPPA4Q7L190 304 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 VASH1Q7L8A9 365 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 GALNT12Q8IXK2 581 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 PROKR2Q8NFJ6 384 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC25A46Q96AG3 418 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 RACGAP1Q9H0H5 632 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 C5AR2Q9P296 337 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 ICKQ9UPZ9 632 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 SMIM30A4D0T7 59 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 RTCAO00442 366 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 TLX2O43763 284 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 PRKYO43930 277 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 LRG1P02750 347 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 MANFP55145 182 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 WDR5P61964 334 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 HSPB3Q12988 150 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 CDK10Q15131 360 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF658BQ4V348 819 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 C22orf42Q6IC83 251 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 USP30Q70CQ3 517 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 TRAPPC5Q8IUR0 188 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 LRRC56Q8IYG6 542 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF366Q8N895 744 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC7A13Q8TCU3 470 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 IL17FQ96PD4 163 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
SLC28A1-201ENST00000286749 HMX3A6NHT5 357 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TGM5O43548 720 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 GUCY1B2O75343 617 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 FHP07954 510 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TYRP14679 529 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ETV5P41161 510 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ETV1P50549 477 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 DMPKQ09013 629 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 GLYR1Q49A26 553 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TMIGD1Q6UXZ0 262 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 LIPIQ6XZB0 460 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TRMT11Q7Z4G4 463 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ADGRF3Q8IZF5 1079 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 OR52I1Q8NGK6 324 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 NELL2Q99435 816 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ACAT2Q9BWD1 397 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC22A4Q9H015 551 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 OR2AG1Q9H205 316 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 PLSCR3Q9NRY6 295 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 HCN2Q9UL51 889 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 PLAGL1Q9UM63 463 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 YARS2Q9Y2Z4 477 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 A0A1W2PQL4 384 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ANHXE9PGG2 379 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 B4GALT2O60909 372 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 TP53P04637 393 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 MSL3P1P0C860 447 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 IRS1P35568 1242 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 MMP12P39900 470 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ASAH1Q13510 395 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 PIN1Q13526 163 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 OCLNQ16625 522 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 SPDYE7PQ495Y7 208 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 FLYWCH1Q4VC44 716 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 ATAT1Q5SQI0 421 aa12.56□□□□□ -0.4
SLC28A1-201ENST00000286749 GALNT6Q8NCL4 622 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms