RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 C10orf82Q8WW14 230 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 DNAJC19Q96DA6 116 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 FUNDC2Q9BWH2 189 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PCDHAC1Q9H158 963 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 DEPDC5O75140 1603 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SNAPINO95295 136 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TSFMP43897 325 aaKnown RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 POU3F4P49335 361 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CXCL9Q07325 125 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ARL16Q0P5N6 197 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ATP6AP1Q15904 470 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 OR1S1Q8NH92 325 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 JOSD2Q8TAC2 188 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 WDR18Q9BV38 432 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PAQR5Q9NXK6 330 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 FZD10Q9ULW2 581 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SMIM28A0A1B0GU29 152 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TCRBV5S4A2TA0A5A2 114 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HAS3O00219 553 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 RASAL1O95294 804 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SERPINA7P05543 415 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ZFP82Q8N141 532 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 OR2M4Q96R27 311 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 OR8D2Q9GZM6 311 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 RPF2Q9H7B2 306 aaKnown RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 FBXW11Q9UKB1 542 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PIK3C2BO00750 1634 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 A0A0G2JN53 185 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 AMY2AP04746 511 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 RNASE10Q5GAN6 216 aaKnown RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HAS2Q92819 552 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SAMD11Q96NU1 681 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TNS2Q63HR2 1409 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 EEF1E1-BLOC1S5C9J1V9 151 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PTTG1O95997 202 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CSF1P09603 554 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ADH5P11766 374 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PRPH2P23942 346 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CHRNA4P43681 627 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HYAL2Q12891 473 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CYP27C1Q4G0S4 372 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ACSBG2Q5FVE4 666 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 LRRC73Q5JTD7 316 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 MPP7Q5T2T1 576 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TAC4Q86UU9 113 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF440Q8IYI8 595 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF286AQ9HBT8 521 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SERTAD4Q9NUC0 356 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 RIMS1Q86UR5 1692 aaKnown RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 LMTK2Q8IWU2 1503 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TRBV2A0A0J9YWF9 115 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SLC38A8A6NNN8 435 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 STK17BO94768 372 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CHRNB4P30926 498 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 VIPR1P32241 457 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PRMT2P55345 433 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HABP2Q14520 560 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 FAM214AQ32MH5 1076 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CFAP77Q6ZQR2 320 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 JPH3Q8WXH2 748 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 PELOQ9BRX2 385 aaKnown RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 EBF2Q9HAK2 575 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 UPK3BL1B0FP48 263 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 UPK3BL2E5RIL1 263 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SCGB1D1O95968 90 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 CHRNB1P11230 501 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 GPX6P59796 221 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 FKBP1BP68106 108 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ARHGAP19Q14CB8 494 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ANKRD22Q5VYY1 191 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ENPP7Q6UWV6 458 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 LANCL3Q6ZV70 420 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SNX27Q96L92 541 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HYLS1Q96M11 299 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TTTY10Q9BZA0 68 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 KCNH6Q9H252 994 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SEC14L2O76054 403 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 C6orf47O95873 294 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 BDKRB1P46663 353 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SOX2P48431 317 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 DRICH1Q6PGQ1 229 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SUV39H2Q9H5I1 410 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 C14orf119Q9NWQ9 140 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 H3BSA7 217 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 ETFAP13804 333 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HRH2P25021 359 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 HMGCS1Q01581 520 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 UBE2UQ5VVX9 321 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 TLDC1Q6P9B6 456 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 KIAA0907Q7Z7F0 614 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 SH3YL1Q96HL8 342 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-201ENST00000282516 BMFQ96LC9 184 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 LIPT1Q9Y234 373 aa8.39□□□□□ -1.07
NIPBL-201ENST00000282516 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 HLA-DQB2P05538 268 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TNFSF4P23510 183 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 CD6P30203 668 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 RUNX2Q13950 521 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PCBP2Q15366 365 aaKnown RBP eCLIP8.38□□□□□ -1.074e-10■□□□□ 10.2
NIPBL-201ENST00000282516 ANKRD23Q86SG2 305 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms