RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RIT1Q92963 219 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 GFM2Q969S9 779 aaKnown RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 ANKRD9Q96BM1 317 aaPredicted RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 TM4SF18Q96CE8 201 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 TLCD1Q96CP7 247 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 TUBGCP3Q96CW5 907 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 C19orf60Q96EN9 201 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ART5Q96L15 291 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 PPP3R2Q96LZ3 170 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 GAL3ST4Q96RP7 486 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 UTP23Q9BRU9 249 aaKnown RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 PELOQ9BRX2 385 aaKnown RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 CDCP1Q9H5V8 836 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ZNF395Q9H8N7 513 aaPredicted RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 VIPAS39Q9H9C1 493 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 C1orf109Q9NX04 203 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 STMN3Q9NZ72 180 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 VTI1BQ9UEU0 232 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 MARCOQ9UEW3 520 aaPredicted RBP6.1□□□□□ -1.43
CD44-204ENST00000279452 GIMAP2Q9UG22 337 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ZDHHC2Q9UIJ5 367 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ANAPC2Q9UJX6 822 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 PSME2Q9UL46 239 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ERVK-19Q9WJR5 959 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 B3GNT3Q9Y2A9 372 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 RAP2CQ9Y3L5 183 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 PCDHA9Q9Y5H5 950 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 CSAG2Q9Y5P2 127 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 DNAJC15Q9Y5T4 150 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 NUP210LQ5VU65 1888 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ACACAQ13085 2346 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 ANKRD12Q6UB98 2062 aa6.1□□□□□ -1.43
CD44-204ENST00000279452 CELSR3Q9NYQ7 3312 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 A0A1W2PS29 197 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 OR5H15A6NDH6 313 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 HMGB1P1B2RPK0 211 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 PYCARD-AS1I3L0S3 204 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 WWP2O00308 870 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 PGRMC2O15173 223 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 AKAP10O43572 662 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 MAN1A2O60476 641 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 ZFAND5O76080 213 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 LRATO95237 230 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 WDPCPO95876 746 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 DHRS4L1P0CG22 281 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 SLC35E2P0CK97 266 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 CPMP14384 443 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 DRD2P14416 443 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 PORP16435 677 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 CSNK2A2P19784 350 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 MAPK1P28482 360 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 NTSP30990 170 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 ARRB2P32121 409 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 SOX11P35716 441 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 RPL14P50914 215 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 XKP51811 444 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 MLLT10P55197 1068 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 SOX8P57073 446 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 WDR4P57081 412 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 TRA2BP62995 288 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 RAE1P78406 368 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 BIKQ13323 160 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 ZNF169Q14929 603 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 TLR1Q15399 786 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 TERF2Q15554 542 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 HSP90B2PQ58FF3 399 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 TTMPQ5BVD1 217 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 HLA-DQA1Q5Y7H0 255 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 NOXRED1Q6NXP6 359 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 RNF111Q6ZNA4 994 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 DGAT2L6Q6ZPD8 337 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 SLC29A4Q7RTT9 530 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 SZRD1Q7Z422 152 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 TRIM46Q7Z4K8 759 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 RPS19BP1Q86WX3 136 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 TICAM1Q8IUC6 712 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 ST13P4Q8IZP2 240 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 KIRREL3Q8IZU9 778 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 LRRC25Q8N386 305 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 RBMXL3Q8N7X1 1067 aaKnown RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 ZNF321PQ8N8H1 164 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 FNDC5Q8NAU1 212 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 MORN4Q8NDC4 146 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 CATSPER1Q8NEC5 780 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 OR1N1Q8NGS0 311 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 OR2T11Q8NH01 316 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 LRRC8CQ8TDW0 803 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 ELP5Q8TE02 316 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 PTPMT1Q8WUK0 201 aaPredicted RBP6.09□□□□□ -1.43
CD44-204ENST00000279452 PSMF1Q92530 271 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 PNPLA2Q96AD5 504 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 C5orf34Q96MH7 638 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 TSSK3Q96PN8 268 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 BBS4Q96RK4 519 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 C1orf50Q9BV19 199 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 NUF2Q9BZD4 464 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 EPN3Q9H201 632 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 TUBB1Q9H4B7 451 aa6.09□□□□□ -1.43
CD44-204ENST00000279452 MANSC1Q9H8J5 431 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms