RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CLIC4Q9Y696 253 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 A0A0G2JMZ2 1700 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 RLFQ13129 1914 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 GREB1LQ9C091 1923 aaPredicted RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 BAZ2AQ9UIF9 1905 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 GRIN2DO15399 1336 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 A0A087X0K7 114 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 FEZF1A0PJY2 475 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 PCP4L1A6NKN8 68 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 SUV39H1O43463 412 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 CYTH3O43739 400 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 DFNA5O60443 496 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 SDC3O75056 442 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 OR5F1O95221 314 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 LUC7L3O95232 432 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 VNN1O95497 513 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 C9P02748 559 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ALPIP09923 528 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TMEM191BP0C7N4 346 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 PNMTP11086 282 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ZNF37AP17032 561 aaPredicted RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 NDUFB7P17568 137 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 CD22P20273 847 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 S1PR1P21453 382 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 GATA3P23771 443 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 MARCKSP29966 332 aaPredicted RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 LIPAP38571 399 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 MPLP40238 635 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ETV5P41161 510 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 RPS5P46782 204 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 ACADVLP49748 655 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 PPT1P50897 306 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 JAK3P52333 1124 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ELLP55199 621 aaPredicted RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 SLC37A1P57057 533 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 DSTNP60981 165 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 YWHAGP61981 247 aaKnown RBP eCLIP4.29□□□□□ -1.72
CD44-202ENST00000278385 RPS15P62841 145 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 DLK1P80370 383 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 PPP2R2BQ00005 443 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 SLC34A1Q06495 639 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 NCBP1Q09161 790 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 ANGPT1Q15389 498 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TEX44Q53QW1 395 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 GRTP1Q5TC63 336 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TTC23Q5W5X9 447 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 LCTLQ6UWM7 567 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 FAM159AQ6UWV7 190 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 SYT10Q6XYQ8 523 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ZNF852Q6ZMS4 543 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TPGS1Q6ZTW0 290 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 STXBP4Q6ZWJ1 553 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 SLC24A5Q71RS6 500 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 SLC16A9Q7RTY1 509 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TBC1D26Q86UD7 250 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 HAPLN4Q86UW8 402 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ARHGAP24Q8N264 748 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 FAM109AQ8N4B1 249 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ZCCHC9Q8N567 271 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 DEFB123Q8N688 67 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ZNF611Q8N823 705 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ANKFN1Q8N957 763 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 OR4K14Q8NGD5 310 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 OR4A16Q8NH70 328 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 NDNFQ8TB73 568 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TRMT10AQ8TBZ6 339 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 PIGKQ92643 395 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 CTHRC1Q96CG8 243 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 HARBI1Q96MB7 349 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 RAB40CQ96S21 281 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 NPAS2Q99743 824 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 RTP3Q9BQQ7 232 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 OR52A5Q9H2C5 316 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 MTIF3Q9H2K0 278 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 CUEDC2Q9H467 287 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 FBXO44Q9H4M3 255 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 PXMP2Q9NR77 195 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ZDHHC18Q9NUE0 388 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 DDX28Q9NUL7 540 aaKnown RBP4.29□□□□□ -1.72
CD44-202ENST00000278385 GCNT4Q9P109 453 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 HMGXB4Q9UGU5 601 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 RNF150Q9ULK6 438 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 ICKQ9UPZ9 632 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 B3GNT3Q9Y2A9 372 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 PPIL1Q9Y3C6 166 aa4.29□□□□□ -1.72
CD44-202ENST00000278385 TRAV26-1A0A087WT03 109 aa4.28□□□□□ -1.72
CD44-202ENST00000278385 A0A087WUV0 522 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms