RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 IGKV3-11P04433 115 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 NR2F6P10588 404 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 TAC1P20366 129 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 TLX1P31314 330 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 BUD31P41223 144 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 SLCO1A2P46721 670 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 PER3P56645 1201 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 RNF4P78317 190 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 ALDH6A1Q02252 535 aaKnown RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 IFT88Q13099 833 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 C3AR1Q16581 482 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 NCCRP1Q6ZVX7 275 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 FGD2Q7Z6J4 655 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 MYRIPQ8NFW9 859 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 UBLCP1Q8WVY7 318 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
HMGN3-201ENST00000275036 RASL10BQ96S79 203 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 HBEGFQ99075 208 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 ELOVL6Q9H5J4 265 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 TRPS1Q9UHF7 1281 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 TINAGQ9UJW2 476 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 ZNF835Q9Y2P0 537 aa13.38□□□□□ -0.27
HMGN3-201ENST00000275036 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 GPR75O95800 540 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 KLK1P06870 262 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 GSTA1P08263 222 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 ALOX15P16050 662 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 IMPDH1P20839 514 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 ATP5F1P24539 256 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 RFC3P40938 356 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 SOX3P41225 446 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 MEOX1P50221 254 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 PRKAA2P54646 552 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 PLIN5Q00G26 463 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 IL20RBQ6UXL0 311 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 COMMD6Q7Z4G1 85 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 ST13P4Q8IZP2 240 aaPredicted RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 CDYL2Q8N8U2 506 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 FAM98AQ8NCA5 519 aaKnown RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 OR8K3Q8NH51 312 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 EPS8L3Q8TE67 593 aaKnown RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 TMEM125Q96AQ2 219 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 L3HYPDHQ96EM0 354 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 RBM18Q96H35 190 aaKnown RBP13.37□□□□□ -0.27
HMGN3-201ENST00000275036 ZNF382Q96SR6 550 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 DEPPQ9NTK1 212 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
HMGN3-201ENST00000275036 A0A0G2JMM0 328 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 A0A1W2PPB8 328 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 A0A1W2PRS3 328 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 PINLYPA6NC86 204 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 SMIM23A6NLE4 172 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 A8MVJ9 347 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 KIR3DP1A8MWS1 328 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 G3V2L1 256 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 MANBAO00462 879 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 CCL21O00585 134 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 PEX1O43933 1283 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 CLPSP04118 112 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 COX7A2P14406 83 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 CHN1P15882 459 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 HTR6P50406 440 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 GPR85P60893 370 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 BIKQ13323 160 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 CDSNQ15517 529 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 C10orf62Q5T681 223 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-201ENST00000275036 Q6ZPB1 254 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-201ENST00000275036 TDRPQ86YL5 185 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 MMP21Q8N119 569 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 PSD4Q8NDX1 1056 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 ASB15Q8WXK1 588 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 FBXL20Q96IG2 436 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 C12orf65Q9H3J6 166 aaKnown RBP13.36□□□□□ -0.27
HMGN3-201ENST00000275036 GSTO2Q9H4Y5 243 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 BRF2Q9HAW0 419 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 HPF1Q9NWY4 346 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 COPS7AQ9UBW8 275 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 ADAM29Q9UKF5 820 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 SNX6Q9UNH7 406 aa13.36□□□□□ -0.27
HMGN3-201ENST00000275036 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-201ENST00000275036 ASNA1O43681 348 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 NADKO95544 446 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-201ENST00000275036 PROCP04070 461 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 PRF1P14222 555 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ZNF24P17028 368 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 PTGER1P34995 402 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 VSNL1P62760 191 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ERVK-8P63133 956 aa13.35□□□□□ -0.27
HMGN3-201ENST00000275036 ZNF267Q14586 743 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms